RNA–Protein interactions for RNA: ENST00000453358.5

PTPA-224, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-224ENST00000453358 SLC35A4Q96G79 324 aa11.67□□□□□ -0.54
PTPA-224ENST00000453358 ZC3HAV1LQ96H79 300 aaKnown RBP11.67□□□□□ -0.54
PTPA-224ENST00000453358 SLC39A3Q9BRY0 314 aa11.67□□□□□ -0.54
PTPA-224ENST00000453358 LRRC1Q9BTT6 524 aa11.67□□□□□ -0.54
PTPA-224ENST00000453358 DKKL1Q9UK85 242 aa11.67□□□□□ -0.54
PTPA-224ENST00000453358 ACOT9Q9Y305 439 aa11.67□□□□□ -0.54
PTPA-224ENST00000453358 HEATR5AQ86XA9 2040 aa11.67□□□□□ -0.54
PTPA-224ENST00000453358 CHD3Q12873 2000 aaKnown RBP11.66□□□□□ -0.54
PTPA-224ENST00000453358 OR7A17O14581 309 aa11.66□□□□□ -0.54
PTPA-224ENST00000453358 EIF3HO15372 352 aaKnown RBP eCLIP11.66□□□□□ -0.54
PTPA-224ENST00000453358 EMC8O43402 210 aa11.66□□□□□ -0.54
PTPA-224ENST00000453358 REM1O75628 298 aa11.66□□□□□ -0.54
PTPA-224ENST00000453358 SIX3O95343 332 aaPredicted RBP11.66□□□□□ -0.54
PTPA-224ENST00000453358 CLDN9O95484 217 aa11.66□□□□□ -0.54
PTPA-224ENST00000453358 PCSK2P16519 638 aa11.66□□□□□ -0.54
PTPA-224ENST00000453358 CSNK2A2P19784 350 aaPredicted RBP11.66□□□□□ -0.54
PTPA-224ENST00000453358 GRK2P25098 689 aa11.66□□□□□ -0.54
PTPA-224ENST00000453358 DPP4P27487 766 aa11.66□□□□□ -0.54
PTPA-224ENST00000453358 GAS1P54826 345 aa11.66□□□□□ -0.54
PTPA-224ENST00000453358 CLDN15P56746 228 aa11.66□□□□□ -0.54
PTPA-224ENST00000453358 SIRPAP78324 504 aa11.66□□□□□ -0.54
PTPA-224ENST00000453358 IRF9Q00978 393 aa11.66□□□□□ -0.54
PTPA-224ENST00000453358 LTB4RQ15722 352 aa11.66□□□□□ -0.54
PTPA-224ENST00000453358 TRMT12Q53H54 448 aaKnown RBP11.66□□□□□ -0.54
PTPA-224ENST00000453358 CCNYL2Q5T2Q4 361 aa11.66□□□□□ -0.54
PTPA-224ENST00000453358 FRG2Q64ET8 278 aa11.66□□□□□ -0.54
PTPA-224ENST00000453358 CHMP1BQ7LBR1 199 aa11.66□□□□□ -0.54
PTPA-224ENST00000453358 PAGE2Q7Z2X7 111 aa11.66□□□□□ -0.54
PTPA-224ENST00000453358 METTL4Q8N3J2 472 aa11.66□□□□□ -0.54
PTPA-224ENST00000453358 RNF138Q8WVD3 245 aa11.66□□□□□ -0.54
PTPA-224ENST00000453358 DTNBP1Q96EV8 351 aa11.66□□□□□ -0.54
PTPA-224ENST00000453358 ZNF845Q96IR2 970 aaPredicted RBP11.66□□□□□ -0.54
PTPA-224ENST00000453358 CDK15Q96Q40 435 aa11.66□□□□□ -0.54
PTPA-224ENST00000453358 FRG2BQ96QU4 278 aa11.66□□□□□ -0.54
PTPA-224ENST00000453358 MRPL1Q9BYD6 325 aaKnown RBP11.66□□□□□ -0.54
PTPA-224ENST00000453358 ZNF701Q9NV72 531 aaPredicted RBP11.66□□□□□ -0.54
PTPA-224ENST00000453358 PRODH2Q9UF12 536 aa11.66□□□□□ -0.54
PTPA-224ENST00000453358 GPR55Q9Y2T6 319 aaPredicted RBP11.66□□□□□ -0.54
PTPA-224ENST00000453358 CCDC189A1A4V9 331 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 C1orf226A1L170 272 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 C17orf51A8MQB3 221 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 TSPAN2O60636 221 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 ABCB7O75027 752 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 ERAL1O75616 437 aaKnown RBP11.65□□□□□ -0.54
PTPA-224ENST00000453358 THBDP07204 575 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 GSTA2P09210 222 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 CD8BP10966 210 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 NID1P14543 1247 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 DEKP35659 375 aaKnown RBP11.65□□□□□ -0.54
PTPA-224ENST00000453358 KCNJ5P48544 419 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 MAPK12P53778 367 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 MRPS25P82663 173 aaKnown RBP11.65□□□□□ -0.54
PTPA-224ENST00000453358 MRPS35P82673 323 aaKnown RBP11.65□□□□□ -0.54
PTPA-224ENST00000453358 GUSBP1Q15486 140 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 ANKRD34AQ69YU3 496 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 FAM180BQ6P0A1 224 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 METTL2BQ6P1Q9 378 aaKnown RBP11.65□□□□□ -0.54
PTPA-224ENST00000453358 UBQLNLQ8IYU4 475 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 MEIOBQ8N635 442 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 GBP7Q8N8V2 638 aaPredicted RBP11.65□□□□□ -0.54
PTPA-224ENST00000453358 ZNF610Q8N9Z0 462 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 OR52B6Q8NGF0 335 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 TRPC4APQ8TEL6 797 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 CAVIN3Q969G5 261 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 CNRIP1Q96F85 164 aaPredicted RBP11.65□□□□□ -0.54
PTPA-224ENST00000453358 ZNF681Q96N22 645 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 BTBD9Q96Q07 612 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 ADOQ96SZ5 270 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 NOL11Q9H8H0 719 aaKnown RBP11.65□□□□□ -0.54
PTPA-224ENST00000453358 RNF122Q9H9V4 155 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 AHSPQ9NZD4 102 aa11.65□□□□□ -0.54
PTPA-224ENST00000453358 TNPO3Q9Y5L0 923 aaKnown RBP11.65□□□□□ -0.54
PTPA-224ENST00000453358 A0A087X1B8 175 aa11.64□□□□□ -0.55
PTPA-224ENST00000453358 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.64□□□□□ -0.55
PTPA-224ENST00000453358 H0YC42 278 aa11.64□□□□□ -0.55
PTPA-224ENST00000453358 CCDC188H7C350 402 aa11.64□□□□□ -0.55
PTPA-224ENST00000453358 KLF4O43474 513 aa11.64□□□□□ -0.55
PTPA-224ENST00000453358 GUCY1B2O75343 617 aa11.64□□□□□ -0.55
PTPA-224ENST00000453358 NME6O75414 186 aaPredicted RBP11.64□□□□□ -0.55
PTPA-224ENST00000453358 TNFRSF21O75509 655 aa11.64□□□□□ -0.55
PTPA-224ENST00000453358 SOX30O94993 753 aa11.64□□□□□ -0.55
PTPA-224ENST00000453358 C2P06681 752 aa11.64□□□□□ -0.55
PTPA-224ENST00000453358 CT45A8P0DMV1 189 aa11.64□□□□□ -0.55
PTPA-224ENST00000453358 CT45A9P0DMV2 189 aa11.64□□□□□ -0.55
PTPA-224ENST00000453358 PEPDP12955 493 aa11.64□□□□□ -0.55
PTPA-224ENST00000453358 TBXA2RP21731 343 aa11.64□□□□□ -0.55
PTPA-224ENST00000453358 SUCLG1P53597 346 aaKnown RBP11.64□□□□□ -0.55
PTPA-224ENST00000453358 TPD52P55327 224 aaPredicted RBP11.64□□□□□ -0.55
PTPA-224ENST00000453358 DSCR4P56555 118 aaPredicted RBP11.64□□□□□ -0.55
PTPA-224ENST00000453358 CORO7P57737 925 aa11.64□□□□□ -0.55
PTPA-224ENST00000453358 GALNT1Q10472 559 aaPredicted RBP11.64□□□□□ -0.55
PTPA-224ENST00000453358 TNK1Q13470 666 aa11.64□□□□□ -0.55
PTPA-224ENST00000453358 EFR3AQ14156 821 aa11.64□□□□□ -0.55
PTPA-224ENST00000453358 FGFBP1Q14512 234 aa11.64□□□□□ -0.55
PTPA-224ENST00000453358 FAM83EQ2M2I3 478 aa11.64□□□□□ -0.55
PTPA-224ENST00000453358 CT45A2Q5DJT8 189 aa11.64□□□□□ -0.55
PTPA-224ENST00000453358 C10orf62Q5T681 223 aaPredicted RBP11.64□□□□□ -0.55
PTPA-224ENST00000453358 ZNF704Q6ZNC4 412 aaPredicted RBP11.64□□□□□ -0.55
PTPA-224ENST00000453358 COMMD6Q7Z4G1 85 aa11.64□□□□□ -0.55
PTPA-224ENST00000453358 CCDC91Q7Z6B0 441 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms