RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 SPACA6W5XKT8 324 aa11.02□□□□□ -0.64
VTA1-203ENST00000452973 SPAG17Q6Q759 2223 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 IGHV1OR15-9A0A0B4J2B8 117 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 CENPVL1A0A0U1RR11 272 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 OR5K4A6NMS3 321 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 E9PQ18 207 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 ZSCAN9O15535 394 aaPredicted RBP11.02□□□□□ -0.65
VTA1-203ENST00000452973 ENTPD6O75354 484 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 CDK1P06493 297 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 GABRB1P18505 474 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 LIPAP38571 399 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 BLKP51451 505 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 CSNK2BP67870 215 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 SMAD4Q13485 552 aaKnown RBP11.02□□□□□ -0.65
VTA1-203ENST00000452973 COL13A1Q5TAT6 717 aaPredicted RBP11.02□□□□□ -0.65
VTA1-203ENST00000452973 FIGNL1Q6PIW4 674 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 MAN2C1Q9NTJ4 1040 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 FBXO34Q9NWN3 711 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 HCN3Q9P1Z3 774 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 CABIN1Q9Y6J0 2220 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 A0A0A6YYC8 382 aaPredicted RBP11.02□□□□□ -0.65
VTA1-203ENST00000452973 I3L1I5 382 aaPredicted RBP11.02□□□□□ -0.65
VTA1-203ENST00000452973 PTHP01270 115 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 WNT1P04628 370 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 TRHRP34981 398 aaPredicted RBP11.02□□□□□ -0.65
VTA1-203ENST00000452973 COL19A1Q14993 1142 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 MED22Q15528 200 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 CEBPEQ15744 281 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 TIGD6Q17RP2 521 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 CLEC12AQ5QGZ9 265 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 AP1ARQ63HQ0 302 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 SLCO6A1Q86UG4 719 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 MIPOL1Q8TD10 442 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 GPR151Q8TDV0 419 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 TRNT1Q96Q11 434 aaKnown RBP11.02□□□□□ -0.65
VTA1-203ENST00000452973 MAP3K3Q99759 626 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 PINK1Q9BXM7 581 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 EGLN3Q9H6Z9 239 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 IL20RAQ9UHF4 553 aa11.02□□□□□ -0.65
VTA1-203ENST00000452973 COL4A2P08572 1712 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 COL6A3P12111 3177 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 LOC100506127A0A0U1RQW1 187 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 A0A1W2PRQ8 180 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 FAM170BA6NMN3 283 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 TLX2O43763 284 aaPredicted RBP11.01□□□□□ -0.65
VTA1-203ENST00000452973 OXSR1O95747 527 aaPredicted RBP11.01□□□□□ -0.65
VTA1-203ENST00000452973 BMP8BP34820 402 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 CLK1P49759 484 aaKnown RBP11.01□□□□□ -0.65
VTA1-203ENST00000452973 DEFB133Q30KQ1 61 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 INAVAQ3KP66 663 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 ZNF730Q6ZMV8 503 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 ZNF614Q8N883 585 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 ZNF675Q8TD23 568 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 RNF31Q96EP0 1072 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 PRRC1Q96M27 445 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 BTBD2Q9BX70 525 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 SEMA4GQ9NTN9 838 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 KLHL28Q9NXS3 571 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 FBXL21Q9UKT6 434 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 ACAD8Q9UKU7 415 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 LIPT1Q9Y234 373 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 CHST2Q9Y4C5 530 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 A0A087WUU8 490 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.01□□□□□ -0.65
VTA1-203ENST00000452973 DUXAA6NLW8 204 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 GALR3O60755 368 aaPredicted RBP11.01□□□□□ -0.65
VTA1-203ENST00000452973 UBXN7O94888 489 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 CT62P0C5K7 136 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 ACP2P11117 423 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 BMXP51813 675 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 MAT1AQ00266 395 aaKnown RBP11.01□□□□□ -0.65
VTA1-203ENST00000452973 TMED1Q13445 227 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 FRRS1Q6ZNA5 592 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 PLEKHM3Q6ZWE6 761 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 YIPF6Q96EC8 236 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 FAM46AQ96IP4 442 aaKnown RBP11.01□□□□□ -0.65
VTA1-203ENST00000452973 ITPAQ9BY32 194 aa11.01□□□□□ -0.65
VTA1-203ENST00000452973 CACYBPQ9HB71 228 aaKnown RBP11.01□□□□□ -0.65
VTA1-203ENST00000452973 ARRDC5A6NEK1 342 aa11□□□□□ -0.65
VTA1-203ENST00000452973 AGRPO00253 132 aa11□□□□□ -0.65
VTA1-203ENST00000452973 CASC3O15234 703 aaKnown RBP11□□□□□ -0.65
VTA1-203ENST00000452973 OR10H2O60403 315 aa11□□□□□ -0.65
VTA1-203ENST00000452973 CYP7B1O75881 506 aa11□□□□□ -0.65
VTA1-203ENST00000452973 CLPXO76031 633 aa11□□□□□ -0.65
VTA1-203ENST00000452973 APOL3O95236 402 aa11□□□□□ -0.65
VTA1-203ENST00000452973 NADKO95544 446 aaPredicted RBP11□□□□□ -0.65
VTA1-203ENST00000452973 ADRA2AP08913 450 aa11□□□□□ -0.65
VTA1-203ENST00000452973 GKN3PP0CG01 181 aa11□□□□□ -0.65
VTA1-203ENST00000452973 CD38P28907 300 aa11□□□□□ -0.65
VTA1-203ENST00000452973 EMP3P54852 163 aa11□□□□□ -0.65
VTA1-203ENST00000452973 RPL6Q02878 288 aaKnown RBP11□□□□□ -0.65
VTA1-203ENST00000452973 SLC13A2Q13183 592 aa11□□□□□ -0.65
VTA1-203ENST00000452973 ILKQ13418 452 aa11□□□□□ -0.65
VTA1-203ENST00000452973 GINS1Q14691 196 aa11□□□□□ -0.65
VTA1-203ENST00000452973 PUS10Q3MIT2 529 aaKnown RBP11□□□□□ -0.65
VTA1-203ENST00000452973 SOWAHCQ53LP3 525 aaPredicted RBP11□□□□□ -0.65
VTA1-203ENST00000452973 CDC73Q6P1J9 531 aa11□□□□□ -0.65
VTA1-203ENST00000452973 USP53Q70EK8 1073 aa11□□□□□ -0.65
VTA1-203ENST00000452973 OR2L13Q8N349 312 aa11□□□□□ -0.65
VTA1-203ENST00000452973 ZFPM2Q8WW38 1151 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms