RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 NPC1L1Q9UHC9 1359 aa1.2□□□□□ -2.22
LRCH3-209ENST00000452660 CHD7Q9P2D1 2997 aa1.2□□□□□ -2.22
LRCH3-209ENST00000452660 NFAT5O94916 1531 aa1.2□□□□□ -2.22
LRCH3-209ENST00000452660 PFASO15067 1338 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 CFAP46Q8IYW2 2715 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 FBN1P35555 2871 aaKnown RBP1.19□□□□□ -2.22
LRCH3-209ENST00000452660 FBN3Q75N90 2809 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 SNAI2O43623 268 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 CREB3O43889 395 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 DFNA5O60443 496 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 PSMD10O75832 226 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 PGLSO95336 258 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 GOT2P00505 430 aaKnown RBP1.19□□□□□ -2.22
LRCH3-209ENST00000452660 IGHV3-23P01764 117 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 H2AFZP0C0S5 128 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 MYBL1P10243 752 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 ZNF44P15621 663 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 HMGCLP35914 325 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 DAPK1P53355 1430 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 NAGLUP54802 743 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 SGCBQ16585 318 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 KRT80Q6KB66 452 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 PRR5LQ6MZQ0 368 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 CYP4V2Q6ZWL3 525 aaPredicted RBP1.19□□□□□ -2.22
LRCH3-209ENST00000452660 SMG6Q86US8 1419 aaKnown RBP1.19□□□□□ -2.22
LRCH3-209ENST00000452660 CROCCP3Q8IVE0 287 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 DOCK3Q8IZD9 2030 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 ICA1LQ8NDH6 482 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 NBEAQ8NFP9 2946 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 SNRNP40Q96DI7 357 aaKnown RBP1.19□□□□□ -2.22
LRCH3-209ENST00000452660 RAB40CQ96S21 281 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 JPH2Q9BR39 696 aaPredicted RBP1.19□□□□□ -2.22
LRCH3-209ENST00000452660 ST6GALNAC5Q9BVH7 336 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 NANOGQ9H9S0 305 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 ZNF331Q9NQX6 463 aaPredicted RBP1.19□□□□□ -2.22
LRCH3-209ENST00000452660 CRCT1Q9UGL9 99 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 NOCTQ9UK39 431 aaKnown RBP1.19□□□□□ -2.22
LRCH3-209ENST00000452660 SH3GLB1Q9Y371 365 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 FLVCR1Q9Y5Y0 555 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 FREM2Q5SZK8 3169 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 WDR87Q6ZQQ6 2873 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 COL1A2P08123 1366 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 FLT4P35916 1363 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 KDRP35968 1356 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 TENM4Q6N022 2769 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 PIEZO2Q9H5I5 2752 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 MAST2Q6P0Q8 1798 aa1.19□□□□□ -2.22
LRCH3-209ENST00000452660 CHD9Q3L8U1 2897 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 POLQO75417 2590 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 MGAMO43451 1857 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 KALRNO60229 2985 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 CNOT1A5YKK6 2376 aaKnown RBP1.18□□□□□ -2.22
LRCH3-209ENST00000452660 NAV3Q8IVL0 2385 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 ANKRD50Q9ULJ7 1429 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 IGLV4-60A0A075B6I1 120 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 GTPBP10A4D1E9 387 aaKnown RBP1.18□□□□□ -2.22
LRCH3-209ENST00000452660 SLC15A5A6NIM6 579 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 PPIP5K2O43314 1243 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 KIAA0513O60268 411 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 FCGR3BO75015 233 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 ZNF324O75467 553 aaPredicted RBP1.18□□□□□ -2.22
LRCH3-209ENST00000452660 SLU7O95391 586 aaKnown RBP1.18□□□□□ -2.22
LRCH3-209ENST00000452660 NUDT14O95848 222 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 IGHV3-9P01782 118 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 LYNP07948 512 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 SBK2P0C263 348 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 CT45A10P0DMU9 189 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 TCF4P15884 667 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 CCNE1P24864 410 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 TRPC1P48995 793 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 SLC26A2P50443 739 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 MEF2DQ14814 521 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 KYAT1Q16773 422 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 ODF2Q5BJF6 829 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 FAM46CQ5VWP2 391 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 TXNRD3NBQ6F5E7 133 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 PLPPR4Q7Z2D5 763 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 TGIF2LYQ8IUE0 185 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 TIGD4Q8IY51 512 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 ZNF433Q8N7K0 673 aaPredicted RBP1.18□□□□□ -2.22
LRCH3-209ENST00000452660 ZNF540Q8NDQ6 660 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 RAET1EQ8TD07 263 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 DCPSQ96C86 337 aaKnown RBP1.18□□□□□ -2.22
LRCH3-209ENST00000452660 ZNF274Q96GC6 653 aaPredicted RBP1.18□□□□□ -2.22
LRCH3-209ENST00000452660 TRIM9Q9C026 710 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 MTIF3Q9H2K0 278 aaKnown RBP1.18□□□□□ -2.22
LRCH3-209ENST00000452660 C11orf49Q9H6J7 331 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 NECAP2Q9NVZ3 263 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 RPS6KA6Q9UK32 745 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 LIPGQ9Y5X9 500 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 SCN7AQ01118 1682 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 IGF2RP11717 2491 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 SPTAN1Q13813 2472 aaKnown RBP1.18□□□□□ -2.22
LRCH3-209ENST00000452660 RYR3Q15413 4870 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 AK9Q5TCS8 1911 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 NUP155O75694 1391 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 KIF24Q5T7B8 1368 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 ANKRD30AQ9BXX3 1397 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 TEX15Q9BXT5 2789 aa1.18□□□□□ -2.22
LRCH3-209ENST00000452660 OTOFQ9HC10 1997 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms