RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 UCK2Q9BZX2 261 aa12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 DPY30Q9C005 99 aa12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 BRINP2Q9C0B6 783 aa12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 LIN28AQ9H9Z2 209 aaKnown RBP12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 IL1RL2Q9HB29 575 aa12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 SDR39U1Q9NRG7 319 aaPredicted RBP12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 TNFRSF10DQ9UBN6 386 aa12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 KCNN3Q9UGI6 736 aa12.67□□□□□ -0.38
PDLIM2-213ENST00000448520 A0A1B0GVC2 190 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 FIGNL2A6NMB9 653 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 SCAMP2O15127 329 aaKnown RBP12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 FGF17O60258 216 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 SUSD5O60279 629 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 GLSO94925 669 aaPredicted RBP12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 IGHG3P01860 377 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 ACVR2AP27037 513 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 MSX1P28360 303 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 DGKQP52824 942 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 NUP107P57740 925 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 TRA2BP62995 288 aaKnown RBP12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 RNF4P78317 190 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 DUSP2Q05923 314 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 SQLEQ14534 574 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 SLC10A1Q14973 349 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 GSTA3Q16772 222 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 MPEG1Q2M385 716 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 HYAL4Q2M3T9 481 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 C16orf47Q6ZP98 133 aaPredicted RBP12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 RIMKLAQ8IXN7 391 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 MIER2Q8N344 545 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 FAM109AQ8N4B1 249 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 OR10Q1Q8NGQ4 319 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 DOK4Q8TEW6 326 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 CIDECQ96AQ7 238 aaPredicted RBP12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 EXOSC8Q96B26 276 aaKnown RBP12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 ANKRD9Q96BM1 317 aaPredicted RBP12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 ZNF559Q9BR84 538 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 TTTY12Q9BZ98 90 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 OR8D2Q9GZM6 311 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 REEP4Q9H6H4 257 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 RPF2Q9H7B2 306 aaKnown RBP12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 SACM1LQ9NTJ5 587 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 TRIM33Q9UPN9 1127 aa12.66□□□□□ -0.38
PDLIM2-213ENST00000448520 ZFHX3Q15911 3703 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 SETD2Q9BYW2 2564 aaPredicted RBP12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 PINLYPA6NC86 204 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 NKX2-6A6NCS4 301 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 FAM90A27PA6NNH2 459 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 FAM166BA8MTA8 275 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 C17orf105B2RV13 164 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 NR5A2O00482 541 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 DYRK3O43781 588 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 P04436 131 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 LAMP1P11279 417 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 COX7A2P14406 83 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 DDCP20711 480 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 BUD31P41223 144 aaPredicted RBP12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 ASMTP46597 345 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 STX1BP61266 288 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 PHC1P78364 1004 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 KLF10Q13118 480 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 PGS1Q32NB8 556 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 AGKQ53H12 422 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 PIGGQ5H8A4 983 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 SPANXN4Q5MJ08 99 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 METTL21CQ5VZV1 264 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 SLC48A1Q6P1K1 146 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 IKBIPQ70UQ0 350 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 TRILQ7L0X0 811 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 TREML1Q86YW5 311 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 CCDC71Q8IV32 467 aaPredicted RBP12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 FUNDC1Q8IVP5 155 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 SLC2A12Q8TD20 617 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 PPCDCQ96CD2 204 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 FAIM2Q9BWQ8 316 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 MYLK2Q9H1R3 596 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 MIEF1Q9NQG6 463 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 NPDC1Q9NQX5 325 aaPredicted RBP12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 CCDC167Q9P0B6 97 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 SH3BP4Q9P0V3 963 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 COPS7AQ9UBW8 275 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 ATP6V1HQ9UI12 483 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 CES1P1Q9UKY3 287 aa12.65□□□□□ -0.38
PDLIM2-213ENST00000448520 AKAP6Q13023 2319 aa12.65□□□□□ -0.39
PDLIM2-213ENST00000448520 MTORP42345 2549 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 ABCA4P78363 2273 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 C1orf226A1L170 272 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 FAM47E-STBD1D6RA91 191 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 AQP7O14520 342 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 HCN1O60741 890 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 WDR1O75083 606 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 GUCY1B2O75343 617 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 ERAL1O75616 437 aaKnown RBP12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 SLC22A3O75751 556 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 DRD2P14416 443 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 PRPS1L1P21108 318 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 PIK3R1P27986 724 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 HPCAL1P37235 193 aa12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 MRPL19P49406 292 aaKnown RBP12.64□□□□□ -0.39
PDLIM2-213ENST00000448520 ATP4BP51164 291 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms