RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 BANPQ8N9N5 519 aa8.55□□□□□ -1.04
NIPBL-202ENST00000448238 HSD17B11Q8NBQ5 300 aa8.55□□□□□ -1.04
NIPBL-202ENST00000448238 TMEM59Q9BXS4 323 aa8.55□□□□□ -1.04
NIPBL-202ENST00000448238 C1orf123Q9NWV4 160 aa8.55□□□□□ -1.04
NIPBL-202ENST00000448238 MYOTQ9UBF9 498 aa8.55□□□□□ -1.04
NIPBL-202ENST00000448238 SLC2A6Q9UGQ3 507 aa8.55□□□□□ -1.04
NIPBL-202ENST00000448238 M0R2Z0 102 aa8.55□□□□□ -1.04
NIPBL-202ENST00000448238 GABRA4P48169 554 aa8.55□□□□□ -1.04
NIPBL-202ENST00000448238 GABREP78334 506 aa8.55□□□□□ -1.04
NIPBL-202ENST00000448238 SLC14A1Q13336 389 aa8.55□□□□□ -1.04
NIPBL-202ENST00000448238 SF3A2Q15428 464 aaKnown RBP8.55□□□□□ -1.04
NIPBL-202ENST00000448238 GRIK5Q16478 980 aa8.55□□□□□ -1.04
NIPBL-202ENST00000448238 LPCAT3Q6P1A2 487 aa8.55□□□□□ -1.04
NIPBL-202ENST00000448238 SERPINA11Q86U17 422 aa8.55□□□□□ -1.04
NIPBL-202ENST00000448238 ZNF547Q8IVP9 402 aa8.55□□□□□ -1.04
NIPBL-202ENST00000448238 OR2T4Q8NH00 348 aa8.55□□□□□ -1.04
NIPBL-202ENST00000448238 EMC7Q9NPA0 242 aa8.55□□□□□ -1.04
NIPBL-202ENST00000448238 SLC22A20A6NK97 555 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 NUDT19A8MXV4 375 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 CNR1P21554 472 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 GABARAPL2P60520 117 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 CNTN2Q02246 1040 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 GHRHRQ02643 423 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 ZNF154Q13106 437 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 IRF4Q15306 451 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 GPR155Q7Z3F1 870 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 CNTNAP5Q8WYK1 1306 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 FFAR2O15552 330 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 SEC14L5O43304 696 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 DUSP11O75319 330 aaKnown RBP8.54□□□□□ -1.04
NIPBL-202ENST00000448238 F10P00742 488 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 SERPINA5P05154 406 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 THBS1P07996 1170 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 PPP3CBP16298 524 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 CALCRP30988 508 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 NDUFV1P49821 464 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 HK3P52790 923 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 CATR1Q13166 79 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 PKDCCQ504Y2 493 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 B3GNTL1Q67FW5 361 aaPredicted RBP8.54□□□□□ -1.04
NIPBL-202ENST00000448238 XKR5Q6UX68 686 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 IL20RBQ6UXL0 311 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 BPHLQ86WA6 291 aaPredicted RBP8.54□□□□□ -1.04
NIPBL-202ENST00000448238 ARNTL2Q8WYA1 636 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 TEPSINQ96N21 525 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 ESRP2Q9H6T0 727 aaKnown RBP8.54□□□□□ -1.04
NIPBL-202ENST00000448238 hCG_1818297A0A087WSY0 165 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 ECI1P42126 302 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 BEX3Q00994 111 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 TAF1AQ15573 450 aaPredicted RBP8.54□□□□□ -1.04
NIPBL-202ENST00000448238 FRG2Q64ET8 278 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 WSCD1Q658N2 575 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 ADGRD1Q6QNK2 874 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 FAM183BPQ6ZVS7 135 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 SHFQ7M4L6 423 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 MAMDC2Q7Z304 686 aaPredicted RBP8.54□□□□□ -1.04
NIPBL-202ENST00000448238 OR5K2Q8NHB8 316 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 FRG2BQ96QU4 278 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 PTPN18Q99952 460 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 PKP2Q99959 881 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 OR51J1Q9H342 316 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 ABHD16BQ9H3Z7 469 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 C8orf33Q9H7E9 229 aaPredicted RBP8.54□□□□□ -1.04
NIPBL-202ENST00000448238 SHROOM3Q8TF72 1996 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 CACNA1EQ15878 2313 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 TYRP14679 529 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 STK11Q15831 433 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 UNC5DQ6UXZ4 953 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 NIPA1Q7RTP0 329 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 ADGRG3Q86Y34 549 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 FITM2Q8N6M3 262 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 OR5D14Q8NGL3 314 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 OR5B3Q8NH48 314 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 MED30Q96HR3 178 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 INPP4AQ96PE3 977 aaPredicted RBP8.54□□□□□ -1.04
NIPBL-202ENST00000448238 CGREF1Q99674 301 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 STRADBQ9C0K7 418 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 SLC25A51Q9H1U9 297 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 OVOS2A0A0G2JMS6 1433 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 SPTBN2O15020 2390 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 B4DXG7 233 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 ZNF587BE7ETH6 402 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 PSMD8P48556 350 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 EFNA3P52797 238 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 SLC35A2P78381 396 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 AKR1C1Q04828 323 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 MEX3BQ6ZN04 569 aaKnown RBP8.54□□□□□ -1.04
NIPBL-202ENST00000448238 MBD3L1Q8WWY6 194 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 HAPLN3Q96S86 360 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 CTPS2Q9NRF8 586 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 DUS2Q9NX74 493 aaKnown RBP8.54□□□□□ -1.04
NIPBL-202ENST00000448238 STEAP1Q9UHE8 339 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 RNASEK-C17orf49H0YIS7 233 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 GJA5P36382 358 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 POU3F4P49335 361 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 MAXP61244 160 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 TGFBR3Q03167 851 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 CYP27C1Q4G0S4 372 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 P2RY11Q96G91 374 aa8.54□□□□□ -1.04
NIPBL-202ENST00000448238 NELL2Q99435 816 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms