RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 VSTM2LQ96N03 204 aa13.03□□□□□ -0.32
SREBF1-207ENST00000447641 BTBD9Q96Q07 612 aa13.03□□□□□ -0.32
SREBF1-207ENST00000447641 GAL3ST4Q96RP7 486 aa13.03□□□□□ -0.32
SREBF1-207ENST00000447641 ZBTB18Q99592 522 aa13.03□□□□□ -0.32
SREBF1-207ENST00000447641 PRPF18Q99633 342 aaKnown RBP13.03□□□□□ -0.32
SREBF1-207ENST00000447641 HES7Q9BYE0 225 aa13.03□□□□□ -0.32
SREBF1-207ENST00000447641 BHLHE41Q9C0J9 482 aaPredicted RBP13.03□□□□□ -0.32
SREBF1-207ENST00000447641 NXF5Q9H1B4 397 aaKnown RBP13.03□□□□□ -0.32
SREBF1-207ENST00000447641 PRODH2Q9UF12 536 aa13.03□□□□□ -0.32
SREBF1-207ENST00000447641 BCAP29Q9UHQ4 241 aa13.03□□□□□ -0.32
SREBF1-207ENST00000447641 ASPDHA6ND91 283 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 A8MVJ9 347 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 CT45A8P0DMV1 189 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 CT45A9P0DMV2 189 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 NAGAP17050 411 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 MAP3K8P41279 467 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 MC3RP41968 323 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 NR0B1P51843 470 aaKnown RBP13.02□□□□□ -0.33
SREBF1-207ENST00000447641 MANFP55145 182 aaKnown RBP13.02□□□□□ -0.33
SREBF1-207ENST00000447641 WNT3P56703 355 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 DCAF7P61962 342 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 CT45A2Q5DJT8 189 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 TMEM107Q6UX40 140 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 IL20RBQ6UXL0 311 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 RTL4Q6ZR62 310 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 TMEM178AQ8NBL3 297 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 OR8J2Q8NGG1 315 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 ZFP28Q8NHY6 868 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 TSPEARQ8WU66 669 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 NTNG2Q96CW9 530 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 SPACA9Q96E40 222 aaPredicted RBP13.02□□□□□ -0.33
SREBF1-207ENST00000447641 HSPBAP1Q96EW2 488 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 LCORQ96JN0 433 aaPredicted RBP13.02□□□□□ -0.33
SREBF1-207ENST00000447641 C5orf34Q96MH7 638 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 OR52B2Q96RD2 323 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 CCDC106Q9BWC9 280 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 ITPAQ9BY32 194 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 SIRT3Q9NTG7 399 aaPredicted RBP13.02□□□□□ -0.33
SREBF1-207ENST00000447641 ATAD3AQ9NVI7 634 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 ASF1BQ9NVP2 202 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 HPF1Q9NWY4 346 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 TAS2R9Q9NYW1 312 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 VPS4AQ9UN37 437 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 ERVK-11Q9UQG0 969 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 NPFFR2Q9Y5X5 522 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 COPG1Q9Y678 874 aaKnown RBP13.02□□□□□ -0.33
SREBF1-207ENST00000447641 APCP25054 2843 aa13.02□□□□□ -0.33
SREBF1-207ENST00000447641 A0A1W2PRB8 838 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 FRG2CA6NGY1 282 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 ENO4A6NNW6 628 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 BBIP1A8MTZ0 92 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 CAPN14A8MX76 684 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 ACOX3O15254 700 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 SCN2BO60939 215 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 DCTP40126 519 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 CDK9P50750 372 aaKnown RBP13.01□□□□□ -0.33
SREBF1-207ENST00000447641 PHC1P78364 1004 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 MXRA7P84157 204 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 SRSF11Q05519 484 aaKnown RBP13.01□□□□□ -0.33
SREBF1-207ENST00000447641 HSPB3Q12988 150 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 KLF10Q13118 480 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 MRPL49Q13405 166 aaKnown RBP13.01□□□□□ -0.33
SREBF1-207ENST00000447641 CYLC2Q14093 348 aaPredicted RBP13.01□□□□□ -0.33
SREBF1-207ENST00000447641 NTRK2Q16620 822 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 EXOSC6Q5RKV6 272 aaKnown RBP13.01□□□□□ -0.33
SREBF1-207ENST00000447641 HLA-DQA1Q5Y7H0 255 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 GALNTL5Q7Z4T8 443 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 TAGAPQ8N103 731 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 DNAJB8Q8NHS0 232 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 GRHL3Q8TE85 626 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 PAQR8Q8TEZ7 354 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 FAR1Q8WVX9 515 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 OR5P2Q8WZ92 322 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 TMEM125Q96AQ2 219 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 TEX37Q96LM6 180 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 DPY30Q9C005 99 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 FOLH1BQ9HBA9 442 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 TIMMDC1Q9NPL8 285 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 KLHL1Q9NR64 748 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 ZIM2Q9NZV7 527 aa13.01□□□□□ -0.33
SREBF1-207ENST00000447641 CHCHD2Q9Y6H1 151 aaPredicted RBP13.01□□□□□ -0.33
SREBF1-207ENST00000447641 GIMAP1-GIMAP5A0A087WTJ2 511 aa13□□□□□ -0.33
SREBF1-207ENST00000447641 RNASET2O00584 256 aaKnown RBP13□□□□□ -0.33
SREBF1-207ENST00000447641 COQ9O75208 318 aa13□□□□□ -0.33
SREBF1-207ENST00000447641 NME6O75414 186 aaPredicted RBP13□□□□□ -0.33
SREBF1-207ENST00000447641 RASAL1O95294 804 aa13□□□□□ -0.33
SREBF1-207ENST00000447641 EFNA1P20827 205 aaPredicted RBP13□□□□□ -0.33
SREBF1-207ENST00000447641 ABCD3P28288 659 aa13□□□□□ -0.33
SREBF1-207ENST00000447641 IL12AP29459 219 aa13□□□□□ -0.33
SREBF1-207ENST00000447641 CLNS1AP54105 237 aaKnown RBP13□□□□□ -0.33
SREBF1-207ENST00000447641 UFM1P61960 85 aa13□□□□□ -0.33
SREBF1-207ENST00000447641 PSPHP78330 225 aa13□□□□□ -0.33
SREBF1-207ENST00000447641 PSG6Q00889 435 aa13□□□□□ -0.33
SREBF1-207ENST00000447641 MAPKAPK3Q16644 382 aa13□□□□□ -0.33
SREBF1-207ENST00000447641 PDCD4Q53EL6 469 aaKnown RBP13□□□□□ -0.33
SREBF1-207ENST00000447641 TMEM198Q66K66 360 aa13□□□□□ -0.33
SREBF1-207ENST00000447641 NPSR1Q6W5P4 371 aa13□□□□□ -0.33
SREBF1-207ENST00000447641 TMEM64Q6YI46 380 aa13□□□□□ -0.33
SREBF1-207ENST00000447641 SULF2Q8IWU5 870 aa13□□□□□ -0.33
SREBF1-207ENST00000447641 PCYOX1LQ8NBM8 494 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms