RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 FGF20Q9NP95 211 aaPredicted RBP13.15□□□□□ -0.3
VPS52-212ENST00000445902 A4GNTQ9UNA3 340 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 ZDHHC11BP0C7U3 371 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 PTGER1P34995 402 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 DGCR2P98153 550 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 TAP2Q03519 686 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 DSG2Q14126 1118 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 SLC36A2Q495M3 483 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 GLB1LQ6UWU2 654 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 OR2T4Q8NH00 348 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 COQ8AQ8NI60 647 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 SCAMP4Q969E2 229 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 GPBP1L1Q9HC44 474 aaPredicted RBP13.14□□□□□ -0.31
VPS52-212ENST00000445902 KLHL1Q9NR64 748 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 CYSLTR2Q9NS75 346 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 FLVCR2Q9UPI3 526 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 EXOSC1Q9Y3B2 195 aaKnown RBP13.14□□□□□ -0.31
VPS52-212ENST00000445902 ASB4Q9Y574 426 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 MEIKINA0A087WXM9 373 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 A0A0B4J203 849 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 SLC28A2O43868 658 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 UGDHO60701 494 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 ALDOBP05062 364 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 ATP1B2P14415 290 aaPredicted RBP13.14□□□□□ -0.31
VPS52-212ENST00000445902 ZP3P21754 424 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 PBLDP30039 288 aaPredicted RBP13.14□□□□□ -0.31
VPS52-212ENST00000445902 LCN1P31025 176 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 BMP8BP34820 402 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 PTSQ03393 145 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 ZNF273Q14593 569 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 SYPL1Q16563 259 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 GSG1Q2KHT4 349 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 CLLU1OSQ5K130 101 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 EOGTQ5NDL2 527 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 SLC30A6Q6NXT4 461 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 CHST9Q7L1S5 443 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 BMP8AQ7Z5Y6 402 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 STPG2Q8N412 459 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 ZNF485Q8NCK3 441 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 WBP1Q96G27 269 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 PDXPQ96GD0 296 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 KCNK12Q9HB15 430 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 BRD7Q9NPI1 651 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 TAAR2Q9P1P5 351 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 G3V3Q6 166 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 GATBO75879 557 aaKnown RBP13.14□□□□□ -0.31
VPS52-212ENST00000445902 KLHL18O94889 574 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 ANKRD34CP0C6C1 535 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 XPAP23025 273 aaPredicted RBP13.14□□□□□ -0.31
VPS52-212ENST00000445902 KIAA1024LP59773 190 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 CDK5Q00535 292 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 SLBPQ14493 270 aaKnown RBP eCLIP13.14□□□□□ -0.31
VPS52-212ENST00000445902 GRIN2CQ14957 1233 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 MED27Q6P2C8 311 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 GET4Q7L5D6 327 aaPredicted RBP13.14□□□□□ -0.31
VPS52-212ENST00000445902 NLRC3Q7RTR2 1065 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 LRRC28Q86X40 367 aaPredicted RBP13.14□□□□□ -0.31
VPS52-212ENST00000445902 ZNF740Q8NDX6 193 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 OR5D16Q8NGK9 328 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 TEX47Q8TBZ9 253 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 FGF11Q92914 225 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 SGTBQ96EQ0 304 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 SCRN2Q96FV2 425 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 SFXN2Q96NB2 322 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 REG4Q9BYZ8 158 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 LYARQ9NX58 379 aaKnown RBP13.14□□□□□ -0.31
VPS52-212ENST00000445902 NUBP2Q9Y5Y2 271 aa13.14□□□□□ -0.31
VPS52-212ENST00000445902 SIRT4Q9Y6E7 314 aaPredicted RBP13.14□□□□□ -0.31
VPS52-212ENST00000445902 SLC22A23A1A5C7 686 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 SRPRAP08240 638 aaKnown RBP13.13□□□□□ -0.31
VPS52-212ENST00000445902 H2AFB2P0C5Z0 115 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 ACSL1P33121 698 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 MINDY4Q4G0A6 757 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 SFRP5Q5T4F7 317 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 ALKAL2Q6UX46 152 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 ADAMTS19Q8TE59 1207 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 ZFPM2Q8WW38 1151 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 HGDQ93099 445 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 ZNF354BQ96LW1 612 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 ZNF578Q96N58 590 aaPredicted RBP13.13□□□□□ -0.31
VPS52-212ENST00000445902 SMG9Q9H0W8 520 aaKnown RBP13.13□□□□□ -0.31
VPS52-212ENST00000445902 C11orf49Q9H6J7 331 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 HRH3Q9Y5N1 445 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 FAM183AA6NL82 134 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 PLATP00750 562 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 URODP06132 367 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 MPC1LP0DKB6 136 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 SULT1A3P0DMM9 295 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 SULT1A4P0DMN0 295 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 RPL17P18621 184 aaKnown RBP13.13□□□□□ -0.31
VPS52-212ENST00000445902 HSD3B2P26439 372 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 IMPA1P29218 277 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 TPMTP51580 245 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 BLVRAP53004 296 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 COL9A2Q14055 689 aaPredicted RBP13.13□□□□□ -0.31
VPS52-212ENST00000445902 OPCMLQ14982 345 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 HECTD3Q5T447 861 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 LRFN4Q6PJG9 635 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 WASH2PQ6VEQ5 465 aa13.13□□□□□ -0.31
VPS52-212ENST00000445902 IZUMO1Q8IYV9 350 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms