RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 APC2O95996 2303 aa16.11■□□□□ 0.17
SGCE-206ENST00000445866 HMGN4O00479 90 aa16.11■□□□□ 0.17
SGCE-206ENST00000445866 NKX2-2O95096 273 aa16.11■□□□□ 0.17
SGCE-206ENST00000445866 AGR2O95994 175 aa16.11■□□□□ 0.17
SGCE-206ENST00000445866 TXNL4AP83876 142 aaKnown RBP16.11■□□□□ 0.17
SGCE-206ENST00000445866 FADDQ13158 208 aa16.11■□□□□ 0.17
SGCE-206ENST00000445866 CYP51A1Q16850 503 aa16.11■□□□□ 0.17
SGCE-206ENST00000445866 PIGGQ5H8A4 983 aa16.11■□□□□ 0.17
SGCE-206ENST00000445866 ATAD3BQ5T9A4 648 aa16.11■□□□□ 0.17
SGCE-206ENST00000445866 H3F3CQ6NXT2 135 aa16.11■□□□□ 0.17
SGCE-206ENST00000445866 NPSR1Q6W5P4 371 aa16.11■□□□□ 0.17
SGCE-206ENST00000445866 TAGAPQ8N103 731 aa16.11■□□□□ 0.17
SGCE-206ENST00000445866 C10orf111Q8N326 155 aa16.11■□□□□ 0.17
SGCE-206ENST00000445866 COX18Q8N8Q8 333 aa16.11■□□□□ 0.17
SGCE-206ENST00000445866 OR4N2Q8NGD1 307 aa16.11■□□□□ 0.17
SGCE-206ENST00000445866 PSMF1Q92530 271 aa16.11■□□□□ 0.17
SGCE-206ENST00000445866 HOXB13Q92826 284 aaPredicted RBP16.11■□□□□ 0.17
SGCE-206ENST00000445866 CDS1Q92903 461 aa16.11■□□□□ 0.17
SGCE-206ENST00000445866 STACQ99469 402 aa16.11■□□□□ 0.17
SGCE-206ENST00000445866 EXD2Q9NVH0 621 aa16.11■□□□□ 0.17
SGCE-206ENST00000445866 THUMPD1Q9NXG2 353 aaKnown RBP16.11■□□□□ 0.17
SGCE-206ENST00000445866 GIN1Q9NXP7 522 aa16.11■□□□□ 0.17
SGCE-206ENST00000445866 STMN3Q9NZ72 180 aa16.11■□□□□ 0.17
SGCE-206ENST00000445866 TMEM181Q9P2C4 612 aa16.11■□□□□ 0.17
SGCE-206ENST00000445866 KCNMB2Q9Y691 235 aa16.11■□□□□ 0.17
SGCE-206ENST00000445866 DMXL2Q8TDJ6 3036 aa16.11■□□□□ 0.17
SGCE-206ENST00000445866 GXYLT2A0PJZ3 443 aa16.1■□□□□ 0.17
SGCE-206ENST00000445866 FRG2CA6NGY1 282 aa16.1■□□□□ 0.17
SGCE-206ENST00000445866 OR2J2O76002 312 aa16.1■□□□□ 0.17
SGCE-206ENST00000445866 NUDT7P0C024 238 aa16.1■□□□□ 0.17
SGCE-206ENST00000445866 NRG3P56975 720 aa16.1■□□□□ 0.17
SGCE-206ENST00000445866 SOX8P57073 446 aa16.1■□□□□ 0.17
SGCE-206ENST00000445866 DSTNP60981 165 aa16.1■□□□□ 0.17
SGCE-206ENST00000445866 LIPEQ05469 1076 aa16.1■□□□□ 0.17
SGCE-206ENST00000445866 RAPSNQ13702 412 aa16.1■□□□□ 0.17
SGCE-206ENST00000445866 EXOSC6Q5RKV6 272 aaKnown RBP16.1■□□□□ 0.17
SGCE-206ENST00000445866 B3GNTL1Q67FW5 361 aaPredicted RBP16.1■□□□□ 0.17
SGCE-206ENST00000445866 IFNEQ86WN2 208 aa16.1■□□□□ 0.17
SGCE-206ENST00000445866 LGI4Q8N135 537 aa16.1■□□□□ 0.17
SGCE-206ENST00000445866 ZNF441Q8N8Z8 693 aa16.1■□□□□ 0.17
SGCE-206ENST00000445866 C17orf47Q8NEP4 570 aa16.1■□□□□ 0.17
SGCE-206ENST00000445866 HSPBAP1Q96EW2 488 aa16.1■□□□□ 0.17
SGCE-206ENST00000445866 ZNF354BQ96LW1 612 aa16.1■□□□□ 0.17
SGCE-206ENST00000445866 ZNF583Q96ND8 569 aa16.1■□□□□ 0.17
SGCE-206ENST00000445866 BTBD2Q9BX70 525 aa16.1■□□□□ 0.17
SGCE-206ENST00000445866 TEKT2Q9UIF3 430 aa16.1■□□□□ 0.17
SGCE-206ENST00000445866 A8MVJ9 347 aa16.09■□□□□ 0.17
SGCE-206ENST00000445866 NME4O00746 187 aa16.09■□□□□ 0.17
SGCE-206ENST00000445866 ACOX3O15254 700 aa16.09■□□□□ 0.17
SGCE-206ENST00000445866 ASNA1O43681 348 aa16.09■□□□□ 0.17
SGCE-206ENST00000445866 TNFRSF21O75509 655 aa16.09■□□□□ 0.17
SGCE-206ENST00000445866 DNAJB5O75953 348 aa16.09■□□□□ 0.17
SGCE-206ENST00000445866 NR2F1P10589 423 aa16.09■□□□□ 0.17
SGCE-206ENST00000445866 TRHRP34981 398 aaPredicted RBP16.09■□□□□ 0.17
SGCE-206ENST00000445866 MLF1P58340 268 aa16.09■□□□□ 0.17
SGCE-206ENST00000445866 POU6F2P78424 691 aaPredicted RBP16.09■□□□□ 0.17
SGCE-206ENST00000445866 CYP27C1Q4G0S4 372 aa16.09■□□□□ 0.17
SGCE-206ENST00000445866 DNAL1Q4LDG9 190 aa16.09■□□□□ 0.17
SGCE-206ENST00000445866 LACTB2Q53H82 288 aaPredicted RBP16.09■□□□□ 0.17
SGCE-206ENST00000445866 ACER2Q5QJU3 275 aa16.09■□□□□ 0.17
SGCE-206ENST00000445866 GCNT6Q5T4J0 391 aa16.09■□□□□ 0.17
SGCE-206ENST00000445866 RNF148Q8N7C7 305 aa16.09■□□□□ 0.17
SGCE-206ENST00000445866 APOBEC4Q8WW27 367 aaKnown RBP16.09■□□□□ 0.17
SGCE-206ENST00000445866 RMND5BQ96G75 393 aaPredicted RBP16.09■□□□□ 0.17
SGCE-206ENST00000445866 THTPAQ9BU02 230 aa16.09■□□□□ 0.17
SGCE-206ENST00000445866 PACSIN3Q9UKS6 424 aa16.09■□□□□ 0.17
SGCE-206ENST00000445866 CBLCQ9ULV8 474 aa16.09■□□□□ 0.17
SGCE-206ENST00000445866 YARS2Q9Y2Z4 477 aaKnown RBP16.09■□□□□ 0.17
SGCE-206ENST00000445866 URB1O60287 2271 aaKnown RBP16.09■□□□□ 0.17
SGCE-206ENST00000445866 TMEM247A6NEH6 219 aa16.08■□□□□ 0.17
SGCE-206ENST00000445866 MAN1A2O60476 641 aa16.08■□□□□ 0.17
SGCE-206ENST00000445866 ITGA10O75578 1167 aa16.08■□□□□ 0.17
SGCE-206ENST00000445866 SOX11P35716 441 aa16.08■□□□□ 0.17
SGCE-206ENST00000445866 RFX3P48380 749 aa16.08■□□□□ 0.17
SGCE-206ENST00000445866 CXADRP78310 365 aa16.08■□□□□ 0.17
SGCE-206ENST00000445866 FOXK2Q01167 660 aa16.08■□□□□ 0.17
SGCE-206ENST00000445866 ADRM1Q16186 407 aa16.08■□□□□ 0.17
SGCE-206ENST00000445866 DECR1Q16698 335 aa16.08■□□□□ 0.17
SGCE-206ENST00000445866 MEP1AQ16819 746 aa16.08■□□□□ 0.17
SGCE-206ENST00000445866 BNC2Q6ZN30 1099 aaPredicted RBP16.08■□□□□ 0.17
SGCE-206ENST00000445866 GPR155Q7Z3F1 870 aa16.08■□□□□ 0.17
SGCE-206ENST00000445866 C16orf62Q7Z3J2 963 aa16.08■□□□□ 0.17
SGCE-206ENST00000445866 SERPINA11Q86U17 422 aa16.08■□□□□ 0.17
SGCE-206ENST00000445866 APLFQ8IW19 511 aaPredicted RBP16.08■□□□□ 0.17
SGCE-206ENST00000445866 PRR22Q8IZ63 422 aa16.08■□□□□ 0.17
SGCE-206ENST00000445866 MAL2Q969L2 176 aa16.08■□□□□ 0.17
SGCE-206ENST00000445866 LIPT1Q9Y234 373 aa16.08■□□□□ 0.17
SGCE-206ENST00000445866 TO15178 435 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 GSC2O15499 205 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 SLC28A2O43868 658 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 REM1O75628 298 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 KCNK2O95069 426 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 TFPTP0C1Z6 253 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 BMP2P12643 396 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 KRT20P35900 424 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 PIGAP37287 484 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 ST13P50502 369 aaKnown RBP16.08■□□□□ 0.16
SGCE-206ENST00000445866 GZMMP51124 257 aa16.08■□□□□ 0.16
SGCE-206ENST00000445866 EEFSECP57772 596 aaKnown RBP16.08■□□□□ 0.16
SGCE-206ENST00000445866 NCALDP61601 193 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms