RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 REEP4Q9H6H4 257 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 SSU72Q9NP77 194 aaKnown RBP13.5□□□□□ -0.25
USE1-202ENST00000445667 ACKR4Q9NPB9 350 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 KCNK9Q9NPC2 374 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 QPCTLQ9NXS2 382 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 ALKBH4Q9NXW9 302 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 SH3BP4Q9P0V3 963 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 TMED5Q9Y3A6 229 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 KLF2Q9Y5W3 355 aaPredicted RBP13.5□□□□□ -0.25
USE1-202ENST00000445667 NCKAP5O14513 1909 aa13.5□□□□□ -0.25
USE1-202ENST00000445667 PLOD2O00469 737 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 PDPK1O15530 556 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 TSPAN2O60636 221 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 CLDN14O95500 239 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 HSPA4LO95757 839 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 PSG6Q00889 435 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 HSPB3Q12988 150 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 TOMM20Q15388 145 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 ZNF630Q2M218 657 aaPredicted RBP13.49□□□□□ -0.25
USE1-202ENST00000445667 XKR7Q5GH72 579 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 WLSQ5T9L3 541 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 TIGD3Q6B0B8 471 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 TMEM211Q6ICI0 200 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 TMEM81Q6P7N7 255 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 ANGPTL8Q6UXH0 198 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 LARP4Q71RC2 724 aaKnown RBP eCLIP13.49□□□□□ -0.25
USE1-202ENST00000445667 HOMEZQ8IX15 550 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 OR2L13Q8N349 312 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 LIX1Q8N485 282 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 OR1J4Q8NGS1 313 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 SARAFQ96BY9 339 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 EFHD2Q96C19 240 aaPredicted RBP13.49□□□□□ -0.25
USE1-202ENST00000445667 PPP3R2Q96LZ3 170 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 OSBPL11Q9BXB4 747 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 C20orf27Q9GZN8 174 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 DDX18Q9NVP1 670 aaKnown RBP13.49□□□□□ -0.25
USE1-202ENST00000445667 KLRF1Q9NZS2 232 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 C15orf41Q9Y2V0 281 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 OR10H1Q9Y4A9 318 aa13.49□□□□□ -0.25
USE1-202ENST00000445667 NCOA6Q14686 2063 aaPredicted RBP13.48□□□□□ -0.25
USE1-202ENST00000445667 PRAMEF25A6NGN4 478 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 OR6C70A6NIJ9 312 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 C19orf84I3L1E1 186 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 TM9SF1O15321 606 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 BIRC5O15392 142 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 COQ9O75208 318 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 SNRPB2P08579 225 aaKnown RBP13.48□□□□□ -0.25
USE1-202ENST00000445667 DHRS4L1P0CG22 281 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 EFNA1P20827 205 aaPredicted RBP13.48□□□□□ -0.25
USE1-202ENST00000445667 ACVR2AP27037 513 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 PTPN6P29350 595 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 IL12BP29460 328 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 GPC1P35052 558 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 KRT20P35900 424 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 CDK9P50750 372 aaKnown RBP13.48□□□□□ -0.25
USE1-202ENST00000445667 NUP107P57740 925 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 C6orf136Q5SQH8 315 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 RTL6Q6ICC9 239 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 SLC30A6Q6NXT4 461 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 LRIG3Q6UXM1 1119 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 CCDC71Q8IV32 467 aaPredicted RBP13.48□□□□□ -0.25
USE1-202ENST00000445667 NUDT8Q8WV74 236 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 RND1Q92730 232 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 TMCO6Q96DC7 493 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 PGM2Q96G03 612 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 SLC35A4Q96G79 324 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 C1orf50Q9BV19 199 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 UBQLN3Q9H347 655 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 COQ3Q9NZJ6 369 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 MAPRE3Q9UPY8 281 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 SLC6A5Q9Y345 797 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 FAM215AQ9Y5M1 114 aa13.48□□□□□ -0.25
USE1-202ENST00000445667 EXPH5Q8NEV8 1989 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 C15orf38-AP3S2A0A0A6YYH1 394 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 FIGNL2A6NMB9 653 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 TBX19O60806 448 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 SLITRK5O94991 958 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 ZWINTO95229 277 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 PSMG1O95456 288 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 SERPINE1P05121 402 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 HPNP05981 417 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 BGNP21810 368 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 ASMTP46597 345 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 PNLIPRP2P54317 469 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 MANFP55145 182 aaKnown RBP13.47□□□□□ -0.25
USE1-202ENST00000445667 ABCE1P61221 599 aaKnown RBP13.47□□□□□ -0.25
USE1-202ENST00000445667 SNTA1Q13424 505 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 GAB1Q13480 694 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 PDE7AQ13946 482 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 ATP6AP1LQ52LC2 224 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 EIPR1Q53HC9 387 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 WIPI1Q5MNZ9 446 aaPredicted RBP13.47□□□□□ -0.25
USE1-202ENST00000445667 IL23RQ5VWK5 629 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 CROCCP2Q86T23 111 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 ZNF781Q8N8C0 355 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 WDSUB1Q8N9V3 476 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 OR7A2PQ8NGA2 310 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 OR10Q1Q8NGQ4 319 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 CA5BP1Q8WTZ4 195 aa13.47□□□□□ -0.25
USE1-202ENST00000445667 MARVELD3Q96A59 401 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms