RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 GSTO2Q9H4Y5 243 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 MAN2C1Q9NTJ4 1040 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 A0A0A6YYH2 397 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 PIGBOS1A0A0B4J2F0 54 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 A6NJ64 397 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 ANHXE9PGG2 379 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 FAM72CH0Y354 149 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 LDB2O43679 373 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 GIFP27352 417 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 ACTR1BP42025 376 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 ACTR1AP61163 376 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 APOFQ13790 326 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 FAM72AQ5TYM5 149 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 FAM72DQ6L9T8 149 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 SUSD1Q6UWL2 747 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 Q6ZVU0 165 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 FAM72BQ86X60 149 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 CLECL1Q8IZS7 167 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 IQCF1Q8N6M8 205 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 PNO1Q9NRX1 252 aaKnown RBP17.7■□□□□ 0.42
SHANK3-203ENST00000445220 IGKV6-21A0A0C4DH24 114 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 GLOD5A6NK44 160 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 CD9P21926 228 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 MAT2AP31153 395 aaKnown RBP17.7■□□□□ 0.42
SHANK3-203ENST00000445220 SELENOWP63302 87 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 CREB3L2Q70SY1 520 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 TMEM173Q86WV6 379 aaPredicted RBP17.7■□□□□ 0.42
SHANK3-203ENST00000445220 OR52P1PQ8NH57 321 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 SMPDL3BQ92485 455 aa17.7■□□□□ 0.42
SHANK3-203ENST00000445220 AGPAT2O15120 278 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 EMC8O43402 210 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 RNF13O43567 381 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 STATHP02808 62 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 ZNF8P17098 575 aaPredicted RBP17.69■□□□□ 0.42
SHANK3-203ENST00000445220 CD79BP40259 229 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 GPR4P46093 362 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 HTR6P50406 440 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 GHRHRQ02643 423 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 CCDC116Q8IYX3 515 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 DNAJC5GQ8N7S2 189 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 Q8N9G6 341 aaPredicted RBP17.69■□□□□ 0.42
SHANK3-203ENST00000445220 MCOLN1Q9GZU1 580 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 AP1M2Q9Y6Q5 423 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 HPGDSO60760 199 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 BDKRB2P30411 391 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 ERVPABLB-1P60509 514 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 GPAT4Q86UL3 456 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 BOLLQ8N9W6 283 aaKnown RBP17.69■□□□□ 0.42
SHANK3-203ENST00000445220 ELP4Q96EB1 424 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 JSRP1Q96MG2 331 aaPredicted RBP17.69■□□□□ 0.42
SHANK3-203ENST00000445220 OLAHQ9NV23 265 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 SCAMP1O15126 338 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 RAB3DO95716 219 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 H2BFMP0C1H6 154 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 CPOXP36551 454 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 GSTM4Q03013 218 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 MFSD13AQ14CX5 517 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 SERINC5Q86VE9 423 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 MYLIPQ8WY64 445 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 FIZ1Q96SL8 496 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 DCNP07585 359 aaKnown RBP17.69■□□□□ 0.42
SHANK3-203ENST00000445220 PREPP48147 710 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 SLC26A5P58743 744 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 FAM189BP81408 668 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 MEF2AQ02078 507 aaPredicted RBP17.69■□□□□ 0.42
SHANK3-203ENST00000445220 PEA15Q15121 130 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 FLYWCH1Q4VC44 716 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 C1orf220Q5T0J3 134 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 METAP1DQ6UB28 335 aaPredicted RBP17.69■□□□□ 0.42
SHANK3-203ENST00000445220 LRRC28Q86X40 367 aaPredicted RBP17.69■□□□□ 0.42
SHANK3-203ENST00000445220 POC1BQ8TC44 478 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 ZNF300Q96RE9 604 aaPredicted RBP17.69■□□□□ 0.42
SHANK3-203ENST00000445220 ENY2Q9NPA8 101 aa17.69■□□□□ 0.42
SHANK3-203ENST00000445220 PHRF1Q9P1Y6 1649 aaKnown RBP17.69■□□□□ 0.42
SHANK3-203ENST00000445220 IGKV6D-21A0A0A0MT36 114 aa17.68■□□□□ 0.42
SHANK3-203ENST00000445220 A0A1W2PQ45 241 aaPredicted RBP17.68■□□□□ 0.42
SHANK3-203ENST00000445220 A0A1W2PQY0 241 aa17.68■□□□□ 0.42
SHANK3-203ENST00000445220 ANKRD33BA6NCL7 494 aa17.68■□□□□ 0.42
SHANK3-203ENST00000445220 ATP6V1G2-DDX39BF2Z307 99 aa17.68■□□□□ 0.42
SHANK3-203ENST00000445220 TMEM19Q96HH6 336 aa17.68■□□□□ 0.42
SHANK3-203ENST00000445220 FCRL1Q96LA6 429 aa17.68■□□□□ 0.42
SHANK3-203ENST00000445220 SYNPO2LQ9H987 977 aa17.68■□□□□ 0.42
SHANK3-203ENST00000445220 KLHL21Q9UJP4 597 aa17.68■□□□□ 0.42
SHANK3-203ENST00000445220 ARNTLO00327 626 aa17.68■□□□□ 0.42
SHANK3-203ENST00000445220 SCAPQ12770 1279 aa17.68■□□□□ 0.42
SHANK3-203ENST00000445220 SF3B4Q15427 424 aaKnown RBP eCLIP17.68■□□□□ 0.421e-6■■□□□ 12.8
SHANK3-203ENST00000445220 NRROSQ86YC3 692 aa17.68■□□□□ 0.42
SHANK3-203ENST00000445220 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.68■□□□□ 0.42
SHANK3-203ENST00000445220 CMTM8Q8IZV2 173 aa17.68■□□□□ 0.42
SHANK3-203ENST00000445220 NUP43Q8NFH3 380 aa17.68■□□□□ 0.42
SHANK3-203ENST00000445220 OR4K14Q8NGD5 310 aa17.68■□□□□ 0.42
SHANK3-203ENST00000445220 HCAR2Q8TDS4 363 aa17.68■□□□□ 0.42
SHANK3-203ENST00000445220 FUBP1Q96AE4 644 aaKnown RBP17.68■□□□□ 0.42
SHANK3-203ENST00000445220 ALG8Q9BVK2 526 aa17.68■□□□□ 0.42
SHANK3-203ENST00000445220 CARS2Q9HA77 564 aaKnown RBP17.68■□□□□ 0.42
SHANK3-203ENST00000445220 SOX1O00570 391 aaPredicted RBP17.68■□□□□ 0.42
SHANK3-203ENST00000445220 ALX3O95076 343 aa17.68■□□□□ 0.42
SHANK3-203ENST00000445220 C21orf33P30042 268 aaPredicted RBP17.68■□□□□ 0.42
SHANK3-203ENST00000445220 HOXC12P31275 282 aa17.68■□□□□ 0.42
SHANK3-203ENST00000445220 PBX2P40425 430 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms