RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 FAF1Q9UNN5 650 aaPredicted RBP11.29□□□□□ -0.6
LTBR-204ENST00000444814 GPR55Q9Y2T6 319 aaPredicted RBP11.29□□□□□ -0.6
LTBR-204ENST00000444814 SNX8Q9Y5X2 465 aa11.29□□□□□ -0.6
LTBR-204ENST00000444814 CFAP47Q6ZTR5 3102 aa11.29□□□□□ -0.6
LTBR-204ENST00000444814 OR6C70A6NIJ9 312 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 E9PBE3 544 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 UPK1AO00322 258 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 RNASET2O00584 256 aaKnown RBP11.28□□□□□ -0.6
LTBR-204ENST00000444814 SDHDO14521 159 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 UBDO15205 165 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 SASH3O75995 380 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 NADKO95544 446 aaPredicted RBP11.28□□□□□ -0.6
LTBR-204ENST00000444814 ELAVL4P26378 380 aaKnown RBP11.28□□□□□ -0.6
LTBR-204ENST00000444814 DUSP2Q05923 314 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 PRR30Q53SZ7 412 aaPredicted RBP11.28□□□□□ -0.6
LTBR-204ENST00000444814 ANKRD26P1Q6NSI1 321 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 SLC30A6Q6NXT4 461 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 C16orf47Q6ZP98 133 aaPredicted RBP11.28□□□□□ -0.6
LTBR-204ENST00000444814 ZNF551Q7Z340 670 aaPredicted RBP11.28□□□□□ -0.6
LTBR-204ENST00000444814 NUP43Q8NFH3 380 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 OR2M7Q8NG81 312 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 OR7A2PQ8NGA2 310 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 OR8J2Q8NGG1 315 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 SPPL2AQ8TCT8 520 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 SFXN5Q8TD22 340 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 CIDECQ96AQ7 238 aaPredicted RBP11.28□□□□□ -0.6
LTBR-204ENST00000444814 CHMP6Q96FZ7 201 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 VSTM2LQ96N03 204 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 GPR137Q96N19 417 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 SDHAF3Q9NRP4 125 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 ZCCHC3Q9NUD5 404 aaKnown RBP11.28□□□□□ -0.6
LTBR-204ENST00000444814 AIG1Q9NVV5 245 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 ZNF446Q9NWS9 450 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 FAM120CQ9NX05 1096 aaKnown RBP11.28□□□□□ -0.6
LTBR-204ENST00000444814 QPCTLQ9NXS2 382 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 GIMAP2Q9UG22 337 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 TRIM33Q9UPN9 1127 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 EXO1Q9UQ84 846 aaKnown RBP11.28□□□□□ -0.6
LTBR-204ENST00000444814 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.28□□□□□ -0.6
LTBR-204ENST00000444814 GOLGA8QA0A0J9YX86 632 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 A0A1B0GUH1 482 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 GOLGA8OA6NCC3 632 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 DUXAA6NLW8 204 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 GOLGA8NF8WBI6 632 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 CBX6O95503 412 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 ALOX5P09917 674 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 TROVE2P10155 538 aaKnown RBP eCLIP11.28□□□□□ -0.6
LTBR-204ENST00000444814 LAMP1P11279 417 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 EPHA3P29320 983 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 LCN1P31025 176 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 PNLIPRP2P54317 469 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 PRKAG1P54619 331 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 GPR85P60893 370 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 PPIAP62937 165 aaKnown RBP11.28□□□□□ -0.6
LTBR-204ENST00000444814 TXNL4AP83876 142 aaKnown RBP11.28□□□□□ -0.6
LTBR-204ENST00000444814 PDCD4Q53EL6 469 aaKnown RBP11.28□□□□□ -0.6
LTBR-204ENST00000444814 ZNF324BQ6AW86 544 aaPredicted RBP11.28□□□□□ -0.6
LTBR-204ENST00000444814 MTFR2Q6P444 385 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 TMEM81Q6P7N7 255 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 MDGA2Q7Z553 956 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 RIMKLAQ8IXN7 391 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 FAM109AQ8N4B1 249 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 OR5M3Q8NGP4 307 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 GPR151Q8TDV0 419 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 STON2Q8WXE9 905 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 SLC35A4Q96G79 324 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 MAELQ96JY0 434 aaKnown RBP11.28□□□□□ -0.6
LTBR-204ENST00000444814 TAAR6Q96RI8 345 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 LMF2Q9BU23 707 aaKnown RBP11.28□□□□□ -0.6
LTBR-204ENST00000444814 CCDC28BQ9BUN5 200 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 HES7Q9BYE0 225 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 RABEP2Q9H5N1 569 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 RMND5AQ9H871 391 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 TCF7L2Q9NQB0 619 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 KLRF1Q9NZS2 232 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 NTMQ9P121 344 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 CBLCQ9ULV8 474 aa11.28□□□□□ -0.6
LTBR-204ENST00000444814 PIEZO2Q9H5I5 2752 aa11.27□□□□□ -0.6
LTBR-204ENST00000444814 PRSS51A0A1B0GVH4 220 aa11.27□□□□□ -0.61
LTBR-204ENST00000444814 NPIPA5E9PKD4 350 aa11.27□□□□□ -0.61
LTBR-204ENST00000444814 ASNA1O43681 348 aa11.27□□□□□ -0.61
LTBR-204ENST00000444814 SLC22A3O75751 556 aa11.27□□□□□ -0.61
LTBR-204ENST00000444814 UNC5CO95185 931 aa11.27□□□□□ -0.61
LTBR-204ENST00000444814 AGR2O95994 175 aa11.27□□□□□ -0.61
LTBR-204ENST00000444814 IL6P05231 212 aa11.27□□□□□ -0.61
LTBR-204ENST00000444814 ABCB1P08183 1280 aaPredicted RBP11.27□□□□□ -0.61
LTBR-204ENST00000444814 GNLYP22749 145 aa11.27□□□□□ -0.61
LTBR-204ENST00000444814 SOAT1P35610 550 aa11.27□□□□□ -0.61
LTBR-204ENST00000444814 CCT3P49368 545 aaKnown RBP11.27□□□□□ -0.61
LTBR-204ENST00000444814 DIO3P55073 304 aa11.27□□□□□ -0.61
LTBR-204ENST00000444814 NNATQ16517 81 aa11.27□□□□□ -0.61
LTBR-204ENST00000444814 ZNF385BQ569K4 471 aa11.27□□□□□ -0.61
LTBR-204ENST00000444814 ZNF227Q86WZ6 799 aa11.27□□□□□ -0.61
LTBR-204ENST00000444814 IQCF2Q8IXL9 164 aa11.27□□□□□ -0.61
LTBR-204ENST00000444814 MIER2Q8N344 545 aa11.27□□□□□ -0.61
LTBR-204ENST00000444814 CPSF7Q8N684 471 aaKnown RBP11.27□□□□□ -0.61
LTBR-204ENST00000444814 KRTCAP2Q8N6L1 136 aa11.27□□□□□ -0.61
LTBR-204ENST00000444814 AMER2Q8N7J2 671 aa11.27□□□□□ -0.61
LTBR-204ENST00000444814 OR10G3Q8NGC4 313 aa11.27□□□□□ -0.61
LTBR-204ENST00000444814 OR4A15Q8NGL6 344 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms