RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 WLSQ5T9L3 541 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 CES4AQ5XG92 561 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 TMEM198Q66K66 360 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 TIGD3Q6B0B8 471 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 ANKRD26P1Q6NSI1 321 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 NOXRED1Q6NXP6 359 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 TMEM81Q6P7N7 255 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 TMEM107Q6UX40 140 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 PLXDC2Q6UX71 529 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 MEX3BQ6ZN04 569 aaKnown RBP9.92□□□□□ -0.82
SF3A1-203ENST00000444440 ZCCHC23Q6ZST2 131 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 GDF7Q7Z4P5 450 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 YRDCQ86U90 279 aaKnown RBP9.92□□□□□ -0.82
SF3A1-203ENST00000444440 FAM9CQ8IZT9 166 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 EID3Q8N140 333 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 WDSUB1Q8N9V3 476 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 FAM83FQ8NEG4 500 aaPredicted RBP9.92□□□□□ -0.82
SF3A1-203ENST00000444440 RNF138Q8WVD3 245 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 GFM2Q969S9 779 aaKnown RBP9.92□□□□□ -0.82
SF3A1-203ENST00000444440 HSPBAP1Q96EW2 488 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 FCRL1Q96LA6 429 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 LURAP1Q96LR2 239 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 FAM111AQ96PZ2 611 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 TIMP4Q99727 224 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 SPOCK3Q9BQ16 436 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 TRMOQ9BU70 441 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 OSBPL11Q9BXB4 747 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 GLIPR2Q9H4G4 154 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 METTL7AQ9H8H3 244 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 ALKBH4Q9NXW9 302 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 FLRT3Q9NZU0 649 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 GIMAP2Q9UG22 337 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 MAPRE3Q9UPY8 281 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 CFL2Q9Y281 166 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 C15orf38-AP3S2A0A0A6YYH1 394 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 PRAMEF25A6NGN4 478 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 NPIPB8E9PQR5 432 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 ACOX3O15254 700 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 PLOD3O60568 738 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 WDR1O75083 606 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 ERN1O75460 977 aaKnown RBP9.91□□□□□ -0.82
SF3A1-203ENST00000444440 TRAPPC6AO75865 159 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 SNX4O95219 450 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 PSMG1O95456 288 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 MYZAPP0CAP1 466 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 NAGAP17050 411 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 BMP7P18075 431 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 SDC1P18827 310 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 PRPH2P23942 346 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 MASP1P48740 699 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 GAS1P54826 345 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 DLX5P56178 289 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 SNTB1Q13884 538 aaKnown RBP9.91□□□□□ -0.82
SF3A1-203ENST00000444440 UGT3A2Q3SY77 523 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 ACSF3Q4G176 576 aaPredicted RBP9.91□□□□□ -0.82
SF3A1-203ENST00000444440 KANK2Q63ZY3 851 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 VASNQ6EMK4 673 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 POMZP3Q6PJE2 187 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 ACAD11Q709F0 780 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 NUP54Q7Z3B4 507 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 PACS2Q86VP3 889 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 RELL2Q8NC24 303 aaPredicted RBP9.91□□□□□ -0.82
SF3A1-203ENST00000444440 TNIP2Q8NFZ5 429 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 OR10Q1Q8NGQ4 319 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 CLHC1Q8NHS4 586 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 ASB5Q8WWX0 329 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 CIDECQ96AQ7 238 aaPredicted RBP9.91□□□□□ -0.82
SF3A1-203ENST00000444440 ZBTB9Q96C00 473 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 EFHD2Q96C19 240 aaPredicted RBP9.91□□□□□ -0.82
SF3A1-203ENST00000444440 SLC35A4Q96G79 324 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 WDYHV1Q96HA8 205 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 AMDHD1Q96NU7 426 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 BBS4Q96RK4 519 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 UGT2B28Q9BY64 529 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 RTN4RQ9BZR6 473 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 EML4Q9HC35 981 aaKnown RBP9.91□□□□□ -0.82
SF3A1-203ENST00000444440 SERHLQ9NQF3 203 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 RYDENQ9NUL5 291 aaKnown RBP9.91□□□□□ -0.82
SF3A1-203ENST00000444440 TAS2R7Q9NYW3 318 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 KLRF1Q9NZS2 232 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 PRODH2Q9UF12 536 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 FBXL2Q9UKC9 423 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 DNAJC15Q9Y5T4 150 aa9.91□□□□□ -0.82
SF3A1-203ENST00000444440 MED13LQ71F56 2210 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 OR6C70A6NIJ9 312 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 UPK1AO00322 258 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 AZIN1O14977 448 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 CTIFO43310 598 aaKnown RBP9.9□□□□□ -0.82
SF3A1-203ENST00000444440 SEC22BO75396 215 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 REM1O75628 298 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 CHEK2O96017 543 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 LINC00032P0C843 101 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 ZFP36L2P47974 494 aaKnown RBP9.9□□□□□ -0.82
SF3A1-203ENST00000444440 NCBP2P52298 156 aaKnown RBP eCLIP9.9□□□□□ -0.82
SF3A1-203ENST00000444440 DCAF7P61962 342 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 TOMM20Q15388 145 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 RFTN2Q52LD8 501 aaPredicted RBP9.9□□□□□ -0.82
SF3A1-203ENST00000444440 ARL13AQ5H913 290 aaPredicted RBP9.9□□□□□ -0.82
SF3A1-203ENST00000444440 NHSL2Q5HYW2 709 aa9.9□□□□□ -0.82
SF3A1-203ENST00000444440 OR5M10Q6IEU7 315 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms