RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 TUBGCP3Q96CW5 907 aa15.36■□□□□ 0.05
TSPAN9-204ENST00000444315 ZBED6CLQ96FA7 236 aaPredicted RBP15.36■□□□□ 0.05
TSPAN9-204ENST00000444315 EGLN2Q96KS0 407 aa15.36■□□□□ 0.05
TSPAN9-204ENST00000444315 GNRHR2Q96P88 292 aa15.36■□□□□ 0.05
TSPAN9-204ENST00000444315 ZIM3Q96PE6 472 aa15.36■□□□□ 0.05
TSPAN9-204ENST00000444315 C1orf50Q9BV19 199 aa15.36■□□□□ 0.05
TSPAN9-204ENST00000444315 GLIPR2Q9H4G4 154 aa15.36■□□□□ 0.05
TSPAN9-204ENST00000444315 REEP4Q9H6H4 257 aa15.36■□□□□ 0.05
TSPAN9-204ENST00000444315 C3orf14Q9HBI5 128 aa15.36■□□□□ 0.05
TSPAN9-204ENST00000444315 Q9N2J8 555 aa15.36■□□□□ 0.05
TSPAN9-204ENST00000444315 BAIAP2L1Q9UHR4 511 aa15.36■□□□□ 0.05
TSPAN9-204ENST00000444315 DKKL1Q9UK85 242 aa15.36■□□□□ 0.05
TSPAN9-204ENST00000444315 CAMK2AQ9UQM7 478 aa15.36■□□□□ 0.05
TSPAN9-204ENST00000444315 C15orf41Q9Y2V0 281 aa15.36■□□□□ 0.05
TSPAN9-204ENST00000444315 LSM1O15116 133 aaKnown RBP15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 TM9SF1O15321 606 aa15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 PLOD3O60568 738 aa15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 WDR1O75083 606 aa15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 UGT2B11O75310 529 aa15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 TRIM3O75382 744 aaPredicted RBP15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 SDC1P18827 310 aa15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 TACR1P25103 407 aa15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 RPL3P39023 403 aaKnown RBP15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 CLK3P49761 638 aaKnown RBP15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 C1orf185Q5T7R7 199 aa15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 CHERPQ8IWX8 916 aaKnown RBP15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 OR14L1PQ8NHC6 308 aa15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 NEIL3Q8TAT5 605 aa15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 CIDECQ96AQ7 238 aaPredicted RBP15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 TMEM41AQ96HV5 264 aa15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 PPP1R36Q96LQ0 422 aa15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 AMDHD1Q96NU7 426 aa15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 BTBD9Q96Q07 612 aa15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 NODALQ96S42 347 aa15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 DMRTA2Q96SC8 542 aa15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 TUBB1Q9H4B7 451 aa15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 GALNT9Q9HCQ5 603 aa15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 RAB21Q9UL25 225 aa15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 EIF3LQ9Y262 564 aaKnown RBP15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 GPR55Q9Y2T6 319 aaPredicted RBP15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 FREM3P0C091 2139 aa15.35■□□□□ 0.05
TSPAN9-204ENST00000444315 A0A087WV62 115 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 OR6C70A6NIJ9 312 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 FAM47E-STBD1D6RA91 191 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 SCO2O43819 266 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 TYROBPO43914 113 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 ICOSLGO75144 302 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 ZWINTO95229 277 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 SERPINE1P05121 402 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 FGF4P08620 206 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 GABRA1P14867 456 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 TCEA1P23193 301 aaKnown RBP15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 GRNP28799 593 aaKnown RBP15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 CHRNB4P30926 498 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 PSMD4P55036 377 aaKnown RBP15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 NUP107P57740 925 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 PDCD2Q16342 344 aaPredicted RBP15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 DECR1Q16698 335 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 ZNF630Q2M218 657 aaPredicted RBP15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 SPDYE7PQ495Y7 208 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 RFTN2Q52LD8 501 aaPredicted RBP15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 DESI1Q6ICB0 168 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 Q6ZSR9 355 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 ZNF551Q7Z340 670 aaPredicted RBP15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 OR4K17Q8NGC6 315 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 JADE3Q92613 823 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 C11orf24Q96F05 449 aaPredicted RBP15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 VSTM2LQ96N03 204 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 PRPF18Q99633 342 aaKnown RBP15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 PROK2Q9HC23 129 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 SERHLQ9NQF3 203 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 SPRR3Q9UBC9 169 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 GIMAP2Q9UG22 337 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 SLC6A5Q9Y345 797 aa15.34■□□□□ 0.05
TSPAN9-204ENST00000444315 PHF3Q92576 2039 aaKnown RBP15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 NCOA6Q14686 2063 aaPredicted RBP15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 A0A1B0GVC2 190 aa15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 TO15178 435 aa15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 LYPLA1O75608 230 aaPredicted RBP15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 KCNH1O95259 989 aa15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 BCKDHAP12694 445 aa15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 EFNA1P20827 205 aaPredicted RBP15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 CDK9P50750 372 aaKnown RBP15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 STX5Q13190 355 aa15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 MAD2L1Q13257 205 aaPredicted RBP15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 SNTA1Q13424 505 aa15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 SF3B4Q15427 424 aaKnown RBP eCLIP15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 CEBPEQ15744 281 aa15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 VPS26BQ4G0F5 336 aa15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 WIPI1Q5MNZ9 446 aaPredicted RBP15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 TIGD3Q6B0B8 471 aa15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 LRIG3Q6UXM1 1119 aa15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 NPSR1Q6W5P4 371 aa15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 RNF165Q6ZSG1 346 aa15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 WDR53Q7Z5U6 358 aaPredicted RBP15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 YRDCQ86U90 279 aaKnown RBP15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 EXOC3L1Q86VI1 746 aa15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 FBXO30Q8TB52 745 aa15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 MGARPQ8TDB4 240 aa15.33■□□□□ 0.04
TSPAN9-204ENST00000444315 GPR151Q8TDV0 419 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms