RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 REM1O75628 298 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 GLSO94925 669 aaPredicted RBP13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 SNX4O95219 450 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 KRT20P35900 424 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 MRPL19P49406 292 aaKnown RBP13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 PRIM2P49643 509 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 WNT3P56703 355 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 IRX1P78414 480 aaPredicted RBP13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 LRRC74AQ0VAA2 488 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 FOXO1Q12778 655 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 EFR3AQ14156 821 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 PGS1Q32NB8 556 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 RNFT1Q5M7Z0 435 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 OR4F3Q6IEY1 312 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 BHLHB9Q6PI77 547 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 SLC22A16Q86VW1 577 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 PRR22Q8IZ63 422 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 OR56A1Q8NGH5 318 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 OR5M3Q8NGP4 307 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 DIO2Q92813 273 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 TMBIM1Q969X1 311 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 TMCO6Q96DC7 493 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 FAM120BQ96EK7 910 aaKnown RBP13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 GIMAP5Q96F15 307 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 COL21A1Q96P44 957 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 SIKE1Q9BRV8 207 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 CCDC28BQ9BUN5 200 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 ANGPTL4Q9BY76 406 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 TTTY12Q9BZ98 90 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 PROK2Q9HC23 129 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 FAM120CQ9NX05 1096 aaKnown RBP13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 SEC14L3Q9UDX4 400 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 CBLCQ9ULV8 474 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 BOKQ9UMX3 212 aaPredicted RBP13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 OR10H1Q9Y4A9 318 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 PRRC2CQ9Y520 2896 aaKnown RBP13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 NCKAP5O14513 1909 aa13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 HELZ2Q9BYK8 2649 aaKnown RBP13.81□□□□□ -0.2
CSNK1E-210ENST00000442216 PINLYPA6NC86 204 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 TFECO14948 347 aaPredicted RBP13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 POLR3GO15318 223 aaPredicted RBP13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 CFLARO15519 480 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 ASNA1O43681 348 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 EDF1O60869 148 aaKnown RBP13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 SCN2BO60939 215 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 UGT2B11O75310 529 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 NKX2-2O95096 273 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 C6orf47O95873 294 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 EFNA1P20827 205 aaPredicted RBP13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 IL12BP29460 328 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 PIGAP37287 484 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 CASP3P42574 277 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 UQCRFS1P47985 274 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 DNASE1L1P49184 302 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 CCT3P49368 545 aaKnown RBP13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 PSMD4P55036 377 aaKnown RBP13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 UFM1P61960 85 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 KCNJ2P63252 427 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 HBA1P69905 142 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 PLGLB1Q02325 96 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 RBPJQ06330 500 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 MRPL49Q13405 166 aaKnown RBP13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 DECR1Q16698 335 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 EXOSC6Q5RKV6 272 aaKnown RBP13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 PRAMEF20Q5VT98 475 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 TMEM198Q66K66 360 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 MFSD12Q6NUT3 480 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 SLC30A6Q6NXT4 461 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 GFRALQ6UXV0 394 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 GHDCQ8N2G8 530 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 NUDT8Q8WV74 236 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 OR52B2Q96RD2 323 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 ZBTB18Q99592 522 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 DOHHQ9BU89 302 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 CXorf36Q9H7Y0 433 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 ZDHHC11Q9H8X9 412 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 TCF7L2Q9NQB0 619 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 SDR39U1Q9NRG7 319 aaPredicted RBP13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 ZCCHC3Q9NUD5 404 aaKnown RBP13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 QPCTLQ9NXS2 382 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 TUBA8Q9NY65 449 aaPredicted RBP13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 ZIM2Q9NZV7 527 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 PCDHGB4Q9UN71 923 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 DNAJC13O75165 2243 aa13.8□□□□□ -0.2
CSNK1E-210ENST00000442216 ZNF407Q9C0G0 2248 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 A0A0G2JMM0 328 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 A0A1W2PPB8 328 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 A0A1W2PRS3 328 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 CLEC18AA5D8T8 446 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 KIR3DP1A8MWS1 328 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 NPIPA5E9PKD4 350 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 TRIM3O75382 744 aaPredicted RBP13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 NME6O75414 186 aaPredicted RBP13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 UNC5CO95185 931 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 IL6P05231 212 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 KRT16P08779 473 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 S100A3P33764 101 aa13.79□□□□□ -0.2
CSNK1E-210ENST00000442216 IDH3AP50213 366 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms