RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 DCHS2Q6V1P9 2916 aa18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 ANKRD17O75179 2603 aaKnown RBP18.14■□□□□ 0.49
SHROOM1-204ENST00000440118 PLOD3O60568 738 aa18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 ICOSLGO75144 302 aa18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 SPAG7O75391 227 aa18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 NME6O75414 186 aaPredicted RBP18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 TOXO94900 526 aa18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 PTPN6P29350 595 aa18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 RPL38P63173 70 aaKnown RBP18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 TLE4Q04727 773 aa18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 CRYZQ08257 329 aaKnown RBP18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 ZNHIT3Q15649 155 aaPredicted RBP18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 CEBPEQ15744 281 aa18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 EIPR1Q53HC9 387 aa18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 FNDC7Q5VTL7 733 aa18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 FAM71E1Q6IPT2 247 aa18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 TMEM81Q6P7N7 255 aa18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 EMBQ6PCB8 327 aa18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 YRDCQ86U90 279 aaKnown RBP18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 TRABD2AQ86V40 505 aa18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 CLYBLQ8N0X4 340 aa18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 GFM2Q969S9 779 aaKnown RBP18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 LURAP1Q96LR2 239 aa18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 VSTM2LQ96N03 204 aa18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 GATA5Q9BWX5 397 aaPredicted RBP18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 ENKD1Q9H0I2 346 aa18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 EML4Q9HC35 981 aaKnown RBP18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 MKS1Q9NXB0 559 aa18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 DKKL1Q9UK85 242 aa18.13■□□□□ 0.49
SHROOM1-204ENST00000440118 HSPB2A8KAH6 182 aa18.12■□□□□ 0.49
SHROOM1-204ENST00000440118 AHRRA9YTQ3 701 aa18.12■□□□□ 0.49
SHROOM1-204ENST00000440118 MYO1GB0I1T2 1018 aa18.12■□□□□ 0.49
SHROOM1-204ENST00000440118 MSX1P28360 303 aa18.12■□□□□ 0.49
SHROOM1-204ENST00000440118 GPC1P35052 558 aa18.12■□□□□ 0.49
SHROOM1-204ENST00000440118 SOX18P35713 384 aa18.12■□□□□ 0.49
SHROOM1-204ENST00000440118 ADH7P40394 386 aa18.12■□□□□ 0.49
SHROOM1-204ENST00000440118 HSPB2Q16082 182 aa18.12■□□□□ 0.49
SHROOM1-204ENST00000440118 SLC25A35Q3KQZ1 300 aa18.12■□□□□ 0.49
SHROOM1-204ENST00000440118 GALNTL6Q49A17 601 aa18.12■□□□□ 0.49
SHROOM1-204ENST00000440118 ACSF3Q4G176 576 aaPredicted RBP18.12■□□□□ 0.49
SHROOM1-204ENST00000440118 RIPPLY2Q5TAB7 128 aa18.12■□□□□ 0.49
SHROOM1-204ENST00000440118 SZRD1Q7Z422 152 aa18.12■□□□□ 0.49
SHROOM1-204ENST00000440118 HOMEZQ8IX15 550 aa18.12■□□□□ 0.49
SHROOM1-204ENST00000440118 FAM83FQ8NEG4 500 aaPredicted RBP18.12■□□□□ 0.49
SHROOM1-204ENST00000440118 ABTB1Q969K4 478 aaPredicted RBP18.12■□□□□ 0.49
SHROOM1-204ENST00000440118 EFHD2Q96C19 240 aaPredicted RBP18.12■□□□□ 0.49
SHROOM1-204ENST00000440118 SLC35A4Q96G79 324 aa18.12■□□□□ 0.49
SHROOM1-204ENST00000440118 METTL2AQ96IZ6 378 aaKnown RBP18.12■□□□□ 0.49
SHROOM1-204ENST00000440118 TIMP4Q99727 224 aa18.12■□□□□ 0.49
SHROOM1-204ENST00000440118 NPDC1Q9NQX5 325 aaPredicted RBP18.12■□□□□ 0.49
SHROOM1-204ENST00000440118 WIF1Q9Y5W5 379 aa18.12■□□□□ 0.49
SHROOM1-204ENST00000440118 MED12Q93074 2177 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 PDPK1O15530 556 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 SLU7O95391 586 aaKnown RBP18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 LINC00032P0C843 101 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 CT45A8P0DMV1 189 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 CT45A9P0DMV2 189 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 RFX3P48380 749 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 HSPB3Q12988 150 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 MYBPHQ13203 477 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 RCAN2Q14206 197 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 CT45A2Q5DJT8 189 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 KANK2Q63ZY3 851 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 NPSR1Q6W5P4 371 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 LACC1Q8IV20 430 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 ZNF295-AS1Q8N0V1 137 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 BANPQ8N9N5 519 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 ZFP28Q8NHY6 868 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 AGR3Q8TD06 166 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 C14orf79Q96F83 325 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 LRRC46Q96FV0 321 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 CCT7Q99832 543 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 MECRQ9BV79 373 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 UGT2B28Q9BY64 529 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 Q9N2J8 555 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 LGALS13Q9UHV8 139 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 EXO1Q9UQ84 846 aaKnown RBP18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 V9GYY5 206 aaPredicted RBP18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 POLQO75417 2590 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 TACC2O95359 2948 aa18.11■□□□□ 0.49
SHROOM1-204ENST00000440118 FBN2P35556 2912 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 A0A087WV62 115 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 DVL2O14641 736 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 AKAP10O43572 662 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 CBR3O75828 277 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 IL2RAP01589 272 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 BMP7P18075 431 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 PRPH2P23942 346 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 ALDH3A1P30838 453 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 VASNQ6EMK4 673 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 IFNEQ86WN2 208 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 PLCZ1Q86YW0 608 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 TCP10LQ8TDR4 215 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 AENQ8WTP8 325 aaKnown RBP18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 TWIST2Q8WVJ9 160 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 PPCDCQ96CD2 204 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 AMDHD1Q96NU7 426 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 TSSK3Q96PN8 268 aa18.1■□□□□ 0.49
SHROOM1-204ENST00000440118 TRIB1Q96RU8 372 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms