RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 OR12D1P0DN82 309 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 ITGA2P17301 1181 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 RFX2P48378 723 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 RGS6P49758 472 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 KIR2DS3Q14952 304 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 FAHD1Q6P587 224 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 LYPD8Q6UX82 237 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 ZNF438Q7Z4V0 828 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 SUN5Q8TC36 379 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 RASSF5Q8WWW0 418 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 GEMIN6Q8WXD5 167 aaKnown RBP13.32□□□□□ -0.28
LIMD1-202ENST00000440097 COL26A1Q96A83 441 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 MED30Q96HR3 178 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 HRASLS5Q96KN8 279 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 SLC35G5Q96KT7 338 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 SLA2Q9H6Q3 261 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 EQTNQ9NQ60 294 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 GIMAP4Q9NUV9 329 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 ACTR10Q9NZ32 417 aa13.32□□□□□ -0.28
LIMD1-202ENST00000440097 LINC00854A0A1B0GVQ3 168 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 ERVH48-1M5A8F1 160 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 MAN2B1O00754 1011 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 PRAMEF10O60809 474 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 NR2F1P10589 423 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 PVRP15151 417 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 LIMK1P53667 647 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 P2RX3P56373 397 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 EEF1A2Q05639 463 aaKnown RBP13.31□□□□□ -0.28
LIMD1-202ENST00000440097 DUSP7Q16829 419 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 DEFB134Q4QY38 66 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 CEP78Q5JTW2 689 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 PAQR7Q86WK9 346 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 SIX5Q8N196 739 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 CADM2Q8N3J6 435 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 TMCO6Q96DC7 493 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 RNF170Q96K19 258 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 PRDM6Q9NQX0 595 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 HRASLS2Q9NWW9 162 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 RHCGQ9UBD6 479 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 KLF15Q9UIH9 416 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 ASB4Q9Y574 426 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 CCDC88CQ9P219 2028 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 CFAP54Q96N23 3096 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 ZDBF2Q9HCK1 2354 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 CLCA1A8K7I4 914 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 TFECO14948 347 aaPredicted RBP13.31□□□□□ -0.28
LIMD1-202ENST00000440097 TBX19O60806 448 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 LASP1Q14847 261 aaKnown RBP13.31□□□□□ -0.28
LIMD1-202ENST00000440097 CRB2Q5IJ48 1285 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 TMEM107Q6UX40 140 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 ABI3BPQ7Z7G0 1075 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 FAM46DQ8NEK8 389 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 TRNT1Q96Q11 434 aaKnown RBP13.31□□□□□ -0.28
LIMD1-202ENST00000440097 MAPKAP1Q9BPZ7 522 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 OR51I1Q9H343 314 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 SEMA3GQ9NS98 782 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 ZNF780BQ9Y6R6 833 aa13.31□□□□□ -0.28
LIMD1-202ENST00000440097 A0A1W2PS29 197 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 MEIOCA2RUB1 952 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 A6NCN8 305 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 PRAMEF25A6NGN4 478 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 E9PQ18 207 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 HMGN4O00479 90 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 ICMTO60725 284 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 B4GALT2O60909 372 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 SLITRK5O94991 958 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 IFNW1P05000 195 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 PPP2R1BP30154 601 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 TNFSF8P32971 234 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 GPR19Q15760 415 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 ARMC4Q5T2S8 1044 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 VN1R4Q7Z5H5 301 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 HMGN2P46Q86SG4 172 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 SLC30A8Q8IWU4 369 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 TAGAPQ8N103 731 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 SLC37A2Q8TED4 501 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 CNRIP1Q96F85 164 aaPredicted RBP13.3□□□□□ -0.28
LIMD1-202ENST00000440097 COL21A1Q96P44 957 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 EPYCQ99645 322 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 RPRD1BQ9NQG5 326 aaKnown RBP13.3□□□□□ -0.28
LIMD1-202ENST00000440097 TAS2R16Q9NYV7 291 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 CRNNQ9UBG3 495 aaPredicted RBP13.3□□□□□ -0.28
LIMD1-202ENST00000440097 SEC14L3Q9UDX4 400 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 HMX3A6NHT5 357 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 B4DGG1 531 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 CTSVO60911 334 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 POU2F1P14859 743 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 TYRP1P17643 537 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 FAM214AQ32MH5 1076 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 ZMAT1Q5H9K5 638 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 FIGLAQ6QHK4 219 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 STX19Q8N4C7 294 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 TRIM63Q969Q1 353 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 RERGQ96A58 199 aaPredicted RBP13.3□□□□□ -0.28
LIMD1-202ENST00000440097 FYTTD1Q96QD9 318 aaKnown RBP13.3□□□□□ -0.28
LIMD1-202ENST00000440097 RANGRFQ9HD47 186 aaPredicted RBP13.3□□□□□ -0.28
LIMD1-202ENST00000440097 PLCXD1Q9NUJ7 323 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 FKBP14Q9NWM8 211 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 TAS2R7Q9NYW3 318 aa13.3□□□□□ -0.28
LIMD1-202ENST00000440097 SLCO1B1Q9Y6L6 691 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms