RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 PXYLP1Q8TE99 480 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 CCDC107Q8WV48 283 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 KCNJ9Q92806 393 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 RGMAQ96B86 450 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 FRG2BQ96QU4 278 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 RHOFQ9HBH0 211 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 CRLF2Q9HC73 371 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 P2RX2Q9UBL9 471 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 ZNF705EA8MWA4 302 aaPredicted RBP11.05□□□□□ -0.64
CCBE1-202ENST00000439986 NFKBIEO00221 500 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 CPNE6O95741 557 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 FPGSQ05932 587 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 SOX4Q06945 474 aaPredicted RBP11.05□□□□□ -0.64
CCBE1-202ENST00000439986 ZNF534Q76KX8 674 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 GJD3Q8N144 294 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 FAM109AQ8N4B1 249 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 ZNF565Q8N9K5 539 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 ACVR1CQ8NER5 493 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 WDR83Q9BRX9 315 aaKnown RBP11.05□□□□□ -0.64
CCBE1-202ENST00000439986 CYB5R1Q9UHQ9 305 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 TMIGD3P0DMS9 266 aaPredicted RBP11.05□□□□□ -0.64
CCBE1-202ENST00000439986 M6PRP20645 277 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 CD72P21854 359 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 PTBP1P26599 531 aaKnown RBP eCLIP11.05□□□□□ -0.64
CCBE1-202ENST00000439986 OPRL1P41146 370 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 RUNX2Q13950 521 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 UGT8Q16880 541 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 ZNF789Q5FWF6 425 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 NKAPLQ5M9Q1 402 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 DCDC5Q6ZRR9 648 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 TSPYL5Q86VY4 417 aaPredicted RBP11.05□□□□□ -0.64
CCBE1-202ENST00000439986 THOC6Q86W42 341 aaKnown RBP11.05□□□□□ -0.64
CCBE1-202ENST00000439986 SLITRK4Q8IW52 837 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 CCM2Q9BSQ5 444 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 EDEM2Q9BV94 578 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 RAB11FIP5Q9BXF6 653 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 SLC29A3Q9BZD2 475 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 CHODLQ9H9P2 273 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 FBXL12Q9NXK8 326 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 PFKMP08237 780 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 BLKP51451 505 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 OR4D1Q15615 310 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 LIPJQ5W064 366 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 LRRC66Q68CR7 880 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 PGAP1Q75T13 922 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 MAVSQ7Z434 540 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 SUV39H2Q9H5I1 410 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 ESRP2Q9H6T0 727 aaKnown RBP11.05□□□□□ -0.64
CCBE1-202ENST00000439986 TPT1P8Q9HAU6 139 aa11.05□□□□□ -0.64
CCBE1-202ENST00000439986 NOSIPQ9Y314 301 aaKnown RBP11.05□□□□□ -0.64
CCBE1-202ENST00000439986 TCRBV3S1A0A5B6 114 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 AGAP5A6NIR3 686 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 FAM227AF5H4B4 570 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 DUSP11O75319 330 aaKnown RBP11.04□□□□□ -0.64
CCBE1-202ENST00000439986 ITGA10O75578 1167 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 MATN1P21941 496 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 PRRT3Q5FWE3 981 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 TRNP1Q6NT89 227 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 ENPP6Q6UWR7 440 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 MBOAT1Q6ZNC8 495 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 GRASPQ7Z6J2 395 aaPredicted RBP11.04□□□□□ -0.64
CCBE1-202ENST00000439986 AQP11Q8NBQ7 271 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 OR8K5Q8NH50 307 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 TEPSINQ96N21 525 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 AGPAT4Q9NRZ5 378 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 C14orf105Q9NVL8 296 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 PPT2Q9UMR5 302 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 TEX13DA0A0J9YY54 714 aaPredicted RBP11.04□□□□□ -0.64
CCBE1-202ENST00000439986 BCAS1O75363 584 aaPredicted RBP11.04□□□□□ -0.64
CCBE1-202ENST00000439986 GOSR1O95249 250 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 GABARAPL2P60520 117 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 NCS1P62166 190 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 RPS13P62277 151 aaKnown RBP11.04□□□□□ -0.64
CCBE1-202ENST00000439986 NPRL3Q12980 569 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 C11orf49Q9H6J7 331 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 SDR39U1Q9NRG7 319 aaPredicted RBP11.04□□□□□ -0.64
CCBE1-202ENST00000439986 A0A1W2PPK0 400 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 ZNF860A6NHJ4 632 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 FBLL1A6NHQ2 334 aaKnown RBP11.04□□□□□ -0.64
CCBE1-202ENST00000439986 NUDT21O43809 227 aaKnown RBP11.04□□□□□ -0.64
CCBE1-202ENST00000439986 EBLN1P0CF75 366 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 RAC2P15153 192 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 GRPRP30550 384 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 TLE1Q04724 770 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 PIWIL3Q7Z3Z3 882 aaKnown RBP11.04□□□□□ -0.64
CCBE1-202ENST00000439986 TGIF2LXQ8IUE1 241 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 CASTOR1Q8WTX7 329 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 L3HYPDHQ96EM0 354 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 B3GAT2Q9NPZ5 323 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 TMEM248Q9NWD8 314 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 LSM5Q9Y4Y9 91 aaKnown RBP11.04□□□□□ -0.64
CCBE1-202ENST00000439986 RNF215Q9Y6U7 377 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 FAM170BA6NMN3 283 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 EPOP01588 193 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 SNRNP70P08621 437 aaKnown RBP11.04□□□□□ -0.64
CCBE1-202ENST00000439986 IQCF3P0C7M6 154 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 ATP1B2P14415 290 aaPredicted RBP11.04□□□□□ -0.64
CCBE1-202ENST00000439986 KCNQ1P51787 676 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 LRRC37A5PQ49AS3 106 aa11.04□□□□□ -0.64
CCBE1-202ENST00000439986 HSF5Q4G112 596 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms