RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 SLC35A4Q96G79 324 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 GPR137Q96N19 417 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 COL21A1Q96P44 957 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 OR52B2Q96RD2 323 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 ZBTB18Q99592 522 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 SIKE1Q9BRV8 207 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 IL1RL2Q9HB29 575 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 Q9N2J8 555 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 TCF7L2Q9NQB0 619 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 SDR39U1Q9NRG7 319 aaPredicted RBP10.86□□□□□ -0.67
HSPG2-206ENST00000439717 ZCCHC3Q9NUD5 404 aaKnown RBP10.86□□□□□ -0.67
HSPG2-206ENST00000439717 FAM120CQ9NX05 1096 aaKnown RBP10.86□□□□□ -0.67
HSPG2-206ENST00000439717 ZIM2Q9NZV7 527 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 SEC14L3Q9UDX4 400 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 MRTO4Q9UKD2 239 aaKnown RBP10.86□□□□□ -0.67
HSPG2-206ENST00000439717 BOKQ9UMX3 212 aaPredicted RBP10.86□□□□□ -0.67
HSPG2-206ENST00000439717 PCDHGB4Q9UN71 923 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 OR10H1Q9Y4A9 318 aa10.86□□□□□ -0.67
HSPG2-206ENST00000439717 SHANK1Q9Y566 2161 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 A0A0G2JMM0 328 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 A0A1W2PPB8 328 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 A0A1W2PRS3 328 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 KIR3DP1A8MWS1 328 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 TFECO14948 347 aaPredicted RBP10.85□□□□□ -0.67
HSPG2-206ENST00000439717 CFLARO15519 480 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 TSPAN2O60636 221 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 EDF1O60869 148 aaKnown RBP10.85□□□□□ -0.67
HSPG2-206ENST00000439717 SCN2BO60939 215 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 NME6O75414 186 aaPredicted RBP10.85□□□□□ -0.67
HSPG2-206ENST00000439717 REM1O75628 298 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 SLC22A3O75751 556 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 GLSO94925 669 aaPredicted RBP10.85□□□□□ -0.67
HSPG2-206ENST00000439717 SOX30O94993 753 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 IL12BP29460 328 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 S100A3P33764 101 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 PIGAP37287 484 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 MAP3K8P41279 467 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 CASP3P42574 277 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 DNASE1L1P49184 302 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 CCT3P49368 545 aaKnown RBP10.85□□□□□ -0.67
HSPG2-206ENST00000439717 MRPL19P49406 292 aaKnown RBP10.85□□□□□ -0.67
HSPG2-206ENST00000439717 PRIM2P49643 509 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 PSMD4P55036 377 aaKnown RBP10.85□□□□□ -0.67
HSPG2-206ENST00000439717 AQP5P55064 265 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 KCNJ2P63252 427 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 HBA1P69905 142 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 IRX1P78414 480 aaPredicted RBP10.85□□□□□ -0.67
HSPG2-206ENST00000439717 PLGLB1Q02325 96 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 FOXO1Q12778 655 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 MRPL49Q13405 166 aaKnown RBP10.85□□□□□ -0.67
HSPG2-206ENST00000439717 SNTA1Q13424 505 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 GAB1Q13480 694 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 DECR1Q16698 335 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 FAM174BQ3ZCQ3 159 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 SPDYE7PQ495Y7 208 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 RNFT1Q5M7Z0 435 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 SPANXN4Q5MJ08 99 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 PRAMEF20Q5VT98 475 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 MFSD12Q6NUT3 480 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 GFRALQ6UXV0 394 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 SZRD1Q7Z422 152 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 SLC22A16Q86VW1 577 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 OR56A1Q8NGH5 318 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 NTNG2Q96CW9 530 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 TEX37Q96LM6 180 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 DOHHQ9BU89 302 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 ANGPTL4Q9BY76 406 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 TTTY12Q9BZ98 90 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 CXorf36Q9H7Y0 433 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 PROK2Q9HC23 129 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 EQTNQ9NQ60 294 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 GIN1Q9NXP7 522 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 BTNL2Q9UIR0 455 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 CBLCQ9ULV8 474 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 SNX8Q9Y5X2 465 aa10.85□□□□□ -0.67
HSPG2-206ENST00000439717 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.85□□□□□ -0.67
HSPG2-206ENST00000439717 PINLYPA6NC86 204 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 NPIPA5E9PKD4 350 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 G3V3Y1 287 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 ASNA1O43681 348 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 UGT2B11O75310 529 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 TRIM3O75382 744 aaPredicted RBP10.84□□□□□ -0.67
HSPG2-206ENST00000439717 NKX2-2O95096 273 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 UNC5CO95185 931 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 KCNH1O95259 989 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 IL6P05231 212 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 PGRP06401 933 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 KRT16P08779 473 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 IL12AP29459 219 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 GABRA3P34903 492 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 RFC3P40938 356 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 UQCRFS1P47985 274 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 NME5P56597 212 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 PPIAP62937 165 aaKnown RBP10.84□□□□□ -0.67
HSPG2-206ENST00000439717 PHC1P78364 1004 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 RBPJQ06330 500 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.84□□□□□ -0.67
HSPG2-206ENST00000439717 EXOSC6Q5RKV6 272 aaKnown RBP10.84□□□□□ -0.67
HSPG2-206ENST00000439717 TMEM198Q66K66 360 aa10.84□□□□□ -0.67
HSPG2-206ENST00000439717 SLC30A6Q6NXT4 461 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms