RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 C2orf80Q0P641 193 aa16.81■□□□□ 0.28
AC004540.1-201ENST00000439120 ZNF155Q12901 538 aaPredicted RBP16.81■□□□□ 0.28
AC004540.1-201ENST00000439120 DCST1Q5T197 706 aa16.81■□□□□ 0.28
AC004540.1-201ENST00000439120 GALNT18Q6P9A2 607 aa16.81■□□□□ 0.28
AC004540.1-201ENST00000439120 ZYG11AQ6WRX3 759 aa16.81■□□□□ 0.28
AC004540.1-201ENST00000439120 LARP4Q71RC2 724 aaKnown RBP eCLIP16.81■□□□□ 0.28
AC004540.1-201ENST00000439120 IFNEQ86WN2 208 aa16.81■□□□□ 0.28
AC004540.1-201ENST00000439120 GSPT2Q8IYD1 628 aaKnown RBP16.81■□□□□ 0.28
AC004540.1-201ENST00000439120 UBLCP1Q8WVY7 318 aaPredicted RBP16.81■□□□□ 0.28
AC004540.1-201ENST00000439120 POLDIP3Q9BY77 421 aaKnown RBP16.81■□□□□ 0.28
AC004540.1-201ENST00000439120 STMN4Q9H169 189 aaPredicted RBP16.81■□□□□ 0.28
AC004540.1-201ENST00000439120 CALHM2Q9HA72 323 aa16.81■□□□□ 0.28
AC004540.1-201ENST00000439120 FOLH1BQ9HBA9 442 aa16.81■□□□□ 0.28
AC004540.1-201ENST00000439120 AKAP9Q99996 3911 aa16.81■□□□□ 0.28
AC004540.1-201ENST00000439120 A0A1W2PPM1 405 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 EEF1E1-BLOC1S5C9J1V9 151 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 EEF1E1O43324 174 aaKnown RBP16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 CT45A8P0DMV1 189 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 CT45A9P0DMV2 189 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 DDCP20711 480 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 NTSP30990 170 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 CCT5P48643 541 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 DGKQP52824 942 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 SRYQ05066 204 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 CCDC153Q494R4 210 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 CT45A2Q5DJT8 189 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 SPNS3Q6ZMD2 512 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 PLCZ1Q86YW0 608 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 SLC44A2Q8IWA5 706 aaPredicted RBP16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 WDSUB1Q8N9V3 476 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 ZPLD1Q8TCW7 415 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 NTNG2Q96CW9 530 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 TRIM44Q96DX7 344 aaPredicted RBP16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 SLC35A4Q96G79 324 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 VSTM2LQ96N03 204 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 SH3GL2Q99962 352 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 TXLNGYQ9BZA5 131 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 OR2B2Q9GZK3 357 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 EPB41L4BQ9H329 900 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 TAS2R10Q9NYW0 307 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 CRIM1Q9NZV1 1036 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 DKKL1Q9UK85 242 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 WIF1Q9Y5W5 379 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 CCDC168Q8NDH2 2452 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 CELSR1Q9NYQ6 3014 aa16.8■□□□□ 0.28
AC004540.1-201ENST00000439120 SERTM1A2A2V5 107 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 MBD3L4A6NDZ8 208 aaPredicted RBP16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 MBD3L3A6NE82 208 aaPredicted RBP16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 MBD3L5A6NJ08 208 aaPredicted RBP16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 SMIM23A6NLE4 172 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 G3V2L1 256 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 UBFD1O14562 309 aaKnown RBP16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 PLOD3O60568 738 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 NME6O75414 186 aaPredicted RBP16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 JUNP05412 331 aaKnown RBP16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 CD1EP15812 388 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 CTSSP25774 331 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 OPRM1P35372 400 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 SLCO1A2P46721 670 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 NCBP2P52298 156 aaKnown RBP eCLIP16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 ZNF136P52737 540 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 ART1P52961 327 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 PNLIPRP2P54317 469 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 FOXA1P55317 472 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 TESK1Q15569 626 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 FLYWCH1Q4VC44 716 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 SH2D4BQ5SQS7 431 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 FBXW10Q5XX13 1052 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 AAGABQ6PD74 315 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 FRMD7Q6ZUT3 714 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 KIF18BQ86Y91 864 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 TRIM42Q8IWZ5 723 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 OR7G2Q8NG99 324 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 MBD3L2Q8NHZ7 208 aaPredicted RBP16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 MZB1Q8WU39 189 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 EFHD2Q96C19 240 aaPredicted RBP16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 GPATCH1Q9BRR8 931 aaKnown RBP16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 RRAGDQ9NQL2 400 aaPredicted RBP16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 SIRT5Q9NXA8 310 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 EMCNQ9ULC0 261 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 GRID1Q9ULK0 1009 aa16.79■□□□□ 0.28
AC004540.1-201ENST00000439120 TSPAN2O60636 221 aa16.78■□□□□ 0.28
AC004540.1-201ENST00000439120 CTAG2O75638 210 aa16.78■□□□□ 0.28
AC004540.1-201ENST00000439120 SLITRK5O94991 958 aa16.78■□□□□ 0.28
AC004540.1-201ENST00000439120 PROCP04070 461 aa16.78■□□□□ 0.28
AC004540.1-201ENST00000439120 TMIGD3P0DMS9 266 aaPredicted RBP16.78■□□□□ 0.28
AC004540.1-201ENST00000439120 CPN1P15169 458 aa16.78■□□□□ 0.28
AC004540.1-201ENST00000439120 SRD5A2P31213 254 aa16.78■□□□□ 0.28
AC004540.1-201ENST00000439120 DNAJA1P31689 397 aaKnown RBP16.78■□□□□ 0.28
AC004540.1-201ENST00000439120 AGFG1P52594 562 aaKnown RBP16.78■□□□□ 0.28
AC004540.1-201ENST00000439120 CEBPEQ15744 281 aa16.78■□□□□ 0.28
AC004540.1-201ENST00000439120 FBXL19-AS1Q494R0 122 aa16.78■□□□□ 0.28
AC004540.1-201ENST00000439120 NPSR1Q6W5P4 371 aa16.78■□□□□ 0.28
AC004540.1-201ENST00000439120 OR4K17Q8NGC6 315 aa16.78■□□□□ 0.28
AC004540.1-201ENST00000439120 GOT1L1Q8NHS2 421 aaPredicted RBP16.78■□□□□ 0.28
AC004540.1-201ENST00000439120 FAM222BQ8WU58 562 aa16.78■□□□□ 0.28
AC004540.1-201ENST00000439120 NRGNQ92686 78 aa16.78■□□□□ 0.28
AC004540.1-201ENST00000439120 C11orf24Q96F05 449 aaPredicted RBP16.78■□□□□ 0.28
AC004540.1-201ENST00000439120 SFXN2Q96NB2 322 aa16.78■□□□□ 0.28
AC004540.1-201ENST00000439120 CLEC4MQ9H2X3 399 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms