RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 HNMTP50135 292 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 MANFP55145 182 aaKnown RBP12.61□□□□□ -0.39
ACTN1-204ENST00000438964 CDH11P55287 796 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 TSPAN5P62079 268 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 SLC3A1Q07837 685 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 Q6ZVL8 140 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 C2orf69Q8N8R5 385 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 BOLLQ8N9W6 283 aaKnown RBP12.61□□□□□ -0.39
ACTN1-204ENST00000438964 METTL2AQ96IZ6 378 aaKnown RBP12.61□□□□□ -0.39
ACTN1-204ENST00000438964 KLHL15Q96M94 604 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 SORCS2Q96PQ0 1159 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 CACNG6Q9BXT2 260 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 GPR171O14626 319 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 GPR37L1O60883 481 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 HLA-DQB1P01920 261 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 ACVR1BP36896 505 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 GPR4P46093 362 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 GRIN2CQ14957 1233 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 ANGPT1Q15389 498 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 LIPJQ5W064 366 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 TMEM107Q6UX40 140 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 RNF165Q6ZSG1 346 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 RASSF6Q6ZTQ3 369 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 GANCQ8TET4 914 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 MS4A4AQ96JQ5 239 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 ARHGAP9Q9BRR9 750 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 MTG2Q9H4K7 406 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 AUNIPQ9H7T9 357 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 DDX31Q9H8H2 851 aaKnown RBP12.61□□□□□ -0.39
ACTN1-204ENST00000438964 MGAT4BQ9UQ53 548 aa12.61□□□□□ -0.39
ACTN1-204ENST00000438964 SCN2AQ99250 2005 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 PRAMEF27A3QJZ7 478 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 SLC9A3R1O14745 358 aaPredicted RBP12.6□□□□□ -0.39
ACTN1-204ENST00000438964 ZNF623O75123 536 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 KLHL18O94889 574 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 GNSP15586 552 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 ZP1P60852 638 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 CAMK2DQ13557 499 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 TRIM71Q2Q1W2 868 aaKnown RBP12.6□□□□□ -0.39
ACTN1-204ENST00000438964 FCRLBQ6BAA4 426 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 VASNQ6EMK4 673 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 ATRAIDQ6UW56 229 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 CHCHD4Q8N4Q1 142 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 UXS1Q8NBZ7 420 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 SRFBP1Q8NEF9 429 aaKnown RBP12.6□□□□□ -0.39
ACTN1-204ENST00000438964 LHFPL5Q8TAF8 219 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 FCRL1Q96LA6 429 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 SAV1Q9H4B6 383 aaPredicted RBP12.6□□□□□ -0.39
ACTN1-204ENST00000438964 SERHL2Q9H4I8 314 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 FOLH1BQ9HBA9 442 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 ENOPH1Q9UHY7 261 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 A4GNTQ9UNA3 340 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 GLTPD2A6NH11 291 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 CPSF4LA6NMK7 179 aaKnown RBP12.6□□□□□ -0.39
ACTN1-204ENST00000438964 GFYI3L273 518 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 PPM1DO15297 605 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 TRIM3O75382 744 aaPredicted RBP12.6□□□□□ -0.39
ACTN1-204ENST00000438964 IFNA7P01567 189 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 RRASP10301 218 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 CD70P32970 193 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 OR1D2P34982 312 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 TPBGQ13641 420 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 TMEM201Q5SNT2 666 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 BICRALQ6AI39 1079 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 KIAA1143Q96AT1 154 aaPredicted RBP12.6□□□□□ -0.39
ACTN1-204ENST00000438964 FERD3LQ96RJ6 166 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 SMG9Q9H0W8 520 aaKnown RBP12.6□□□□□ -0.39
ACTN1-204ENST00000438964 CPNE7Q9UBL6 633 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 B4GALT6Q9UBX8 382 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 KCND3Q9UK17 655 aa12.6□□□□□ -0.39
ACTN1-204ENST00000438964 E9PI62 339 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 ACP2P11117 423 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 ACLYP53396 1101 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 RPS7P62081 194 aaKnown RBP12.59□□□□□ -0.39
ACTN1-204ENST00000438964 TBPL1P62380 186 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 MED27Q6P2C8 311 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 Q6ZTK2 550 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 PRICKLE2Q7Z3G6 844 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 SERINC5Q86VE9 423 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 TOMM5Q8N4H5 51 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 OR8K5Q8NH50 307 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 APOBEC4Q8WW27 367 aaKnown RBP12.59□□□□□ -0.39
ACTN1-204ENST00000438964 ZG16BQ96DA0 208 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 NXPE2Q96DL1 559 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 TREX2Q9BQ50 279 aaPredicted RBP12.59□□□□□ -0.39
ACTN1-204ENST00000438964 TMEM175Q9BSA9 504 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 OR10A4Q9H209 315 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 KCNN2Q9H2S1 579 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 OSGEPL1Q9H4B0 414 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 TMEM38AQ9H6F2 299 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 RANBP3Q9H6Z4 567 aaPredicted RBP12.59□□□□□ -0.39
ACTN1-204ENST00000438964 SDHAF2Q9NX18 166 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 WSB2Q9NYS7 404 aaPredicted RBP12.59□□□□□ -0.39
ACTN1-204ENST00000438964 FAAHO00519 579 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 TOR1AO14656 332 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 PI15O43692 258 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 REM1O75628 298 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 KDM4BO94953 1096 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 SIX6O95475 246 aa12.59□□□□□ -0.39
ACTN1-204ENST00000438964 SERPIND1P05546 499 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms