RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 HMGN2P05204 90 aaKnown RBP14.87□□□□□ -0.03
SNRPB-202ENST00000438552 IL6P05231 212 aa14.87□□□□□ -0.03
SNRPB-202ENST00000438552 CD1EP15812 388 aa14.87□□□□□ -0.03
SNRPB-202ENST00000438552 CDKN2CP42773 168 aa14.87□□□□□ -0.03
SNRPB-202ENST00000438552 C19orf57Q0VDD7 668 aa14.87□□□□□ -0.03
SNRPB-202ENST00000438552 RCAN2Q14206 197 aa14.87□□□□□ -0.03
SNRPB-202ENST00000438552 LASP1Q14847 261 aaKnown RBP14.87□□□□□ -0.03
SNRPB-202ENST00000438552 AGKQ53H12 422 aa14.87□□□□□ -0.03
SNRPB-202ENST00000438552 PRAMEF20Q5VT98 475 aa14.87□□□□□ -0.03
SNRPB-202ENST00000438552 DESI1Q6ICB0 168 aa14.87□□□□□ -0.03
SNRPB-202ENST00000438552 FUNDC1Q8IVP5 155 aa14.87□□□□□ -0.03
SNRPB-202ENST00000438552 CDRT4Q8N9R6 151 aa14.87□□□□□ -0.03
SNRPB-202ENST00000438552 GOLM1Q8NBJ4 401 aa14.87□□□□□ -0.03
SNRPB-202ENST00000438552 SLC9A6Q92581 669 aa14.87□□□□□ -0.03
SNRPB-202ENST00000438552 JADE3Q92613 823 aa14.87□□□□□ -0.03
SNRPB-202ENST00000438552 C16orf58Q96GQ5 468 aa14.87□□□□□ -0.03
SNRPB-202ENST00000438552 FAM107BQ9H098 131 aa14.87□□□□□ -0.03
SNRPB-202ENST00000438552 DEPPQ9NTK1 212 aa14.87□□□□□ -0.03
SNRPB-202ENST00000438552 GPATCH2Q9NW75 528 aa14.87□□□□□ -0.03
SNRPB-202ENST00000438552 CCDC167Q9P0B6 97 aa14.87□□□□□ -0.03
SNRPB-202ENST00000438552 PCDHGB4Q9UN71 923 aa14.87□□□□□ -0.03
SNRPB-202ENST00000438552 KLF13Q9Y2Y9 288 aaPredicted RBP14.87□□□□□ -0.03
SNRPB-202ENST00000438552 PCDHGB6Q9Y5F9 930 aa14.87□□□□□ -0.03
SNRPB-202ENST00000438552 CHCHD2Q9Y6H1 151 aaPredicted RBP14.87□□□□□ -0.03
SNRPB-202ENST00000438552 SHANK1Q9Y566 2161 aa14.87□□□□□ -0.03
SNRPB-202ENST00000438552 ZNF462Q96JM2 2506 aa14.86□□□□□ -0.03
SNRPB-202ENST00000438552 GXYLT2A0PJZ3 443 aa14.86□□□□□ -0.03
SNRPB-202ENST00000438552 RASAL1O95294 804 aa14.86□□□□□ -0.03
SNRPB-202ENST00000438552 MAP3K8P41279 467 aa14.86□□□□□ -0.03
SNRPB-202ENST00000438552 PRIM2P49643 509 aa14.86□□□□□ -0.03
SNRPB-202ENST00000438552 MEOX1P50221 254 aa14.86□□□□□ -0.03
SNRPB-202ENST00000438552 KCNK10P57789 538 aa14.86□□□□□ -0.03
SNRPB-202ENST00000438552 RPS26P62854 115 aaKnown RBP14.86□□□□□ -0.03
SNRPB-202ENST00000438552 TLE1Q04724 770 aa14.86□□□□□ -0.03
SNRPB-202ENST00000438552 INPP5JQ15735 1006 aaPredicted RBP14.86□□□□□ -0.03
SNRPB-202ENST00000438552 INAQ16352 499 aa14.86□□□□□ -0.03
SNRPB-202ENST00000438552 DUSP5Q16690 384 aa14.86□□□□□ -0.03
SNRPB-202ENST00000438552 RPUSD3Q6P087 351 aaKnown RBP14.86□□□□□ -0.03
SNRPB-202ENST00000438552 GK5Q6ZS86 529 aa14.86□□□□□ -0.03
SNRPB-202ENST00000438552 DND1Q8IYX4 353 aaKnown RBP14.86□□□□□ -0.03
SNRPB-202ENST00000438552 SLC16A11Q8NCK7 471 aa14.86□□□□□ -0.03
SNRPB-202ENST00000438552 PAQR8Q8TEZ7 354 aa14.86□□□□□ -0.03
SNRPB-202ENST00000438552 PIK3R3Q92569 461 aa14.86□□□□□ -0.03
SNRPB-202ENST00000438552 HOXB13Q92826 284 aaPredicted RBP14.86□□□□□ -0.03
SNRPB-202ENST00000438552 MOAP1Q96BY2 351 aa14.86□□□□□ -0.03
SNRPB-202ENST00000438552 EFHD2Q96C19 240 aaPredicted RBP14.86□□□□□ -0.03
SNRPB-202ENST00000438552 SNRNP40Q96DI7 357 aaKnown RBP14.86□□□□□ -0.03
SNRPB-202ENST00000438552 SLC35G5Q96KT7 338 aa14.86□□□□□ -0.03
SNRPB-202ENST00000438552 SGCZQ96LD1 299 aa14.86□□□□□ -0.03
SNRPB-202ENST00000438552 PANX1Q96RD7 426 aa14.86□□□□□ -0.03
SNRPB-202ENST00000438552 TAAR6Q96RI8 345 aa14.86□□□□□ -0.03
SNRPB-202ENST00000438552 Q9N2J8 555 aa14.86□□□□□ -0.03
SNRPB-202ENST00000438552 SH2D2AQ9NP31 389 aa14.86□□□□□ -0.03
SNRPB-202ENST00000438552 SERHLQ9NQF3 203 aa14.86□□□□□ -0.03
SNRPB-202ENST00000438552 ASPDHA6ND91 283 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 CAPN14A8MX76 684 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 PEX1O43933 1283 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 UGT2B11O75310 529 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 REM1O75628 298 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 NKX2-2O95096 273 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 C1QCP02747 245 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 P04436 131 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 GSNP06396 782 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 CAPN3P20807 821 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 DRD4P21917 467 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 IL12BP29460 328 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 GABRA3P34903 492 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 PIGAP37287 484 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 RFC3P40938 356 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 IRX1P78414 480 aaPredicted RBP14.85□□□□□ -0.03
SNRPB-202ENST00000438552 VPS26BQ4G0F5 336 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 EXOSC6Q5RKV6 272 aaKnown RBP14.85□□□□□ -0.03
SNRPB-202ENST00000438552 BICRALQ6AI39 1079 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 SLC2A7Q6PXP3 512 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 BLOC1S3Q6QNY0 202 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 FAM180AQ6UWF9 173 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 MSANTD1Q6ZTZ1 278 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.85□□□□□ -0.03
SNRPB-202ENST00000438552 SULF2Q8IWU5 870 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 FBXW8Q8N3Y1 598 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 CPSF7Q8N684 471 aaKnown RBP14.85□□□□□ -0.03
SNRPB-202ENST00000438552 GOT1L1Q8NHS2 421 aaPredicted RBP14.85□□□□□ -0.03
SNRPB-202ENST00000438552 CPT1CQ8TCG5 803 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 GPR151Q8TDV0 419 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 GRHL3Q8TE85 626 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 HGDQ93099 445 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 SPDL1Q96EA4 605 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 RMND5BQ96G75 393 aaPredicted RBP14.85□□□□□ -0.03
SNRPB-202ENST00000438552 FRMD6Q96NE9 622 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 SLC35A5Q9BS91 424 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 NSRP1Q9H0G5 558 aaKnown RBP14.85□□□□□ -0.03
SNRPB-202ENST00000438552 SERHL2Q9H4I8 314 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 SLC6A13Q9NSD5 602 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 SACM1LQ9NTJ5 587 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 RYDENQ9NUL5 291 aaKnown RBP14.85□□□□□ -0.03
SNRPB-202ENST00000438552 ASF1BQ9NVP2 202 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 CNOT11Q9UKZ1 510 aaKnown RBP14.85□□□□□ -0.03
SNRPB-202ENST00000438552 CBLCQ9ULV8 474 aa14.85□□□□□ -0.03
SNRPB-202ENST00000438552 NCKAP5O14513 1909 aa14.84□□□□□ -0.03
SNRPB-202ENST00000438552 PINLYPA6NC86 204 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms