RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 KCNS3Q9BQ31 491 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 KXD1Q9BQD3 176 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 MED18Q9BUE0 208 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 TRMT61BQ9BVS5 477 aaKnown RBP9.78□□□□□ -0.84
CD44-210ENST00000434472 POLE4Q9NR33 117 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 MED17Q9NVC6 651 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 NCKAP1Q9Y2A7 1128 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 TRPM6Q9BX84 2022 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 TMEM221A6NGB7 291 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 WASHC1A8K0Z3 465 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 APBB3O95704 486 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 STATHP02808 62 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 HBQ1P09105 142 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 SLC35G6P0C7Q6 338 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 CPN2P22792 545 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 FPR3P25089 353 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 TLX1P31314 330 aaPredicted RBP9.78□□□□□ -0.84
CD44-210ENST00000434472 TNFSF8P32971 234 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 RPS19P39019 145 aaKnown RBP9.78□□□□□ -0.84
CD44-210ENST00000434472 ADPRHP54922 357 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 SEC13P55735 322 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 TNFRSF17Q02223 184 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 CHRNEQ04844 493 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 DUSP2Q05923 314 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 SLC13A2Q13183 592 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 TPBGQ13641 420 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 SUZ12Q15022 739 aaKnown RBP9.78□□□□□ -0.84
CD44-210ENST00000434472 ZNF750Q32MQ0 723 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 EIPR1Q53HC9 387 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 TMPRSS11AQ6ZMR5 421 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 PLEKHM3Q6ZWE6 761 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 UBE2Q1Q7Z7E8 422 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 KIF18BQ86Y91 864 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 FAM20CQ8IXL6 584 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 OR9A2Q8NGT5 310 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 OR52P1PQ8NH57 321 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 HTRA1Q92743 480 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 DIO2Q92813 273 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 EFHD2Q96C19 240 aaPredicted RBP9.78□□□□□ -0.84
CD44-210ENST00000434472 RNFT2Q96EX2 444 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 MS4A4EQ96PG1 132 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 GABRG3Q99928 467 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 MACROD1Q9BQ69 325 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 KLHL25Q9H0H3 589 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 MTHFD2LQ9H903 347 aaPredicted RBP9.78□□□□□ -0.84
CD44-210ENST00000434472 QPCTLQ9NXS2 382 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 PTGFRNQ9P2B2 879 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 KLF15Q9UIH9 416 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 PCOLCE2Q9UKZ9 415 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 CMAHPQ9Y471 501 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 KCNE3Q9Y6H6 103 aa9.78□□□□□ -0.84
CD44-210ENST00000434472 CKAP5Q14008 2032 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 C2orf16Q68DN1 1984 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 CPSF4LA6NMK7 179 aaKnown RBP9.77□□□□□ -0.85
CD44-210ENST00000434472 K7EQS6 105 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 CTDSP2O14595 271 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 SLC30A4O14863 429 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 HMGN1P05114 100 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 ALPPL2P10696 532 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 RGS8P57771 180 aaPredicted RBP9.77□□□□□ -0.85
CD44-210ENST00000434472 NFATC4Q14934 902 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 LARS2Q15031 903 aaKnown RBP9.77□□□□□ -0.85
CD44-210ENST00000434472 PLK5Q496M5 336 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 ATAT1Q5SQI0 421 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 MFSD12Q6NUT3 480 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 HSDL2Q6YN16 418 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 TMEM184AQ6ZMB5 413 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 OLIG3Q7RTU3 272 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 PRICKLE2Q7Z3G6 844 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 AKAP14Q86UN6 197 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 VRK2Q86Y07 508 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 PEX5LQ8IYB4 626 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 CAMKVQ8NCB2 501 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 ANKK1Q8NFD2 765 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 OR4E2Q8NGC2 313 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 OR4K14Q8NGD5 310 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 UFD1Q92890 307 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 GIMAP5Q96F15 307 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 SLC35A4Q96G79 324 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 MYADMQ96S97 322 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 NELL2Q99435 816 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 GPA33Q99795 319 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 COQ7Q99807 217 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 SRMSQ9H3Y6 488 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 EVA1AQ9H8M9 152 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 FGF22Q9HCT0 170 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 EQTNQ9NQ60 294 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 SNTG1Q9NSN8 517 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 SEMA4GQ9NTN9 838 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 TXNL4BQ9NX01 149 aaKnown RBP9.77□□□□□ -0.85
CD44-210ENST00000434472 NLGN3Q9NZ94 848 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 NPAP1Q9NZP6 1156 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 GSTK1Q9Y2Q3 226 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 GRIP1Q9Y3R0 1128 aa9.77□□□□□ -0.85
CD44-210ENST00000434472 PDE4DIPQ5VU43 2346 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 GRXCR1A8MXD5 290 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 CHST10O43529 356 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 TNFSF14O43557 240 aa9.76□□□□□ -0.85
CD44-210ENST00000434472 B3GALT2O43825 422 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms