RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 SCN2BO60939 215 aa16.87■□□□□ 0.29
HLA-F-220ENST00000434407 PIGAP37287 484 aa16.87■□□□□ 0.29
HLA-F-220ENST00000434407 CLNS1AP54105 237 aaKnown RBP16.87■□□□□ 0.29
HLA-F-220ENST00000434407 PHC1P78364 1004 aa16.87■□□□□ 0.29
HLA-F-220ENST00000434407 PLCXD2Q0VAA5 305 aa16.87■□□□□ 0.29
HLA-F-220ENST00000434407 ZNF155Q12901 538 aaPredicted RBP16.87■□□□□ 0.29
HLA-F-220ENST00000434407 LSM12Q3MHD2 195 aaKnown RBP16.87■□□□□ 0.29
HLA-F-220ENST00000434407 TBCELQ5QJ74 424 aa16.87■□□□□ 0.29
HLA-F-220ENST00000434407 GK5Q6ZS86 529 aa16.87■□□□□ 0.29
HLA-F-220ENST00000434407 FAM47EQ6ZV65 393 aa16.87■□□□□ 0.29
HLA-F-220ENST00000434407 NUP54Q7Z3B4 507 aa16.87■□□□□ 0.29
HLA-F-220ENST00000434407 SLC44A2Q8IWA5 706 aaPredicted RBP16.87■□□□□ 0.29
HLA-F-220ENST00000434407 NUP43Q8NFH3 380 aa16.87■□□□□ 0.29
HLA-F-220ENST00000434407 TMBIM1Q969X1 311 aa16.87■□□□□ 0.29
HLA-F-220ENST00000434407 SLC35A4Q96G79 324 aa16.87■□□□□ 0.29
HLA-F-220ENST00000434407 TEX37Q96LM6 180 aa16.87■□□□□ 0.29
HLA-F-220ENST00000434407 OR52B2Q96RD2 323 aa16.87■□□□□ 0.29
HLA-F-220ENST00000434407 C3orf14Q9HBI5 128 aa16.87■□□□□ 0.29
HLA-F-220ENST00000434407 PTPN13Q12923 2485 aa16.87■□□□□ 0.29
HLA-F-220ENST00000434407 G3V3Y1 287 aa16.86■□□□□ 0.29
HLA-F-220ENST00000434407 RNASET2O00584 256 aaKnown RBP16.86■□□□□ 0.29
HLA-F-220ENST00000434407 UGT2B11O75310 529 aa16.86■□□□□ 0.29
HLA-F-220ENST00000434407 RFC3P40938 356 aa16.86■□□□□ 0.29
HLA-F-220ENST00000434407 DNASE1L1P49184 302 aa16.86■□□□□ 0.29
HLA-F-220ENST00000434407 RPP38P78345 283 aaKnown RBP16.86■□□□□ 0.29
HLA-F-220ENST00000434407 SRSF1Q07955 248 aaKnown RBP eCLIP16.86■□□□□ 0.29
HLA-F-220ENST00000434407 DPY19L1Q2PZI1 675 aa16.86■□□□□ 0.29
HLA-F-220ENST00000434407 CYP27C1Q4G0S4 372 aa16.86■□□□□ 0.29
HLA-F-220ENST00000434407 OR4F3Q6IEY1 312 aa16.86■□□□□ 0.29
HLA-F-220ENST00000434407 OR5M3Q8NGP4 307 aa16.86■□□□□ 0.29
HLA-F-220ENST00000434407 RNF138Q8WVD3 245 aa16.86■□□□□ 0.29
HLA-F-220ENST00000434407 FAM120BQ96EK7 910 aaKnown RBP16.86■□□□□ 0.29
HLA-F-220ENST00000434407 MAGED4Q96JG8 741 aa16.86■□□□□ 0.29
HLA-F-220ENST00000434407 MS4A4EQ96PG1 132 aa16.86■□□□□ 0.29
HLA-F-220ENST00000434407 ANGPTL4Q9BY76 406 aa16.86■□□□□ 0.29
HLA-F-220ENST00000434407 TTTY12Q9BZ98 90 aa16.86■□□□□ 0.29
HLA-F-220ENST00000434407 CXorf36Q9H7Y0 433 aa16.86■□□□□ 0.29
HLA-F-220ENST00000434407 ZDHHC11Q9H8X9 412 aa16.86■□□□□ 0.29
HLA-F-220ENST00000434407 IL1RL2Q9HB29 575 aa16.86■□□□□ 0.29
HLA-F-220ENST00000434407 NEUROD4Q9HD90 331 aa16.86■□□□□ 0.29
HLA-F-220ENST00000434407 MED4Q9NPJ6 270 aa16.86■□□□□ 0.29
HLA-F-220ENST00000434407 TUBA8Q9NY65 449 aaPredicted RBP16.86■□□□□ 0.29
HLA-F-220ENST00000434407 PCNX3Q9H6A9 2034 aa16.86■□□□□ 0.29
HLA-F-220ENST00000434407 DOPEY1Q5JWR5 2465 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 NPIPA5E9PKD4 350 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 ASNA1O43681 348 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 TRIM3O75382 744 aaPredicted RBP16.85■□□□□ 0.29
HLA-F-220ENST00000434407 NKX2-2O95096 273 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 C6orf47O95873 294 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 IDO1P14902 403 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 IL12AP29459 219 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 CASP3P42574 277 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 KIR3DL1P43629 444 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 PNLIPRP2P54317 469 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 UFM1P61960 85 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 HBA1P69905 142 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 PRR5P85299 388 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 GAB1Q13480 694 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 EIF2S3LQ2VIR3 472 aaKnown RBP16.85■□□□□ 0.29
HLA-F-220ENST00000434407 PGS1Q32NB8 556 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 CMPK2Q5EBM0 449 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 PRAMEF20Q5VT98 475 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 BICRALQ6AI39 1079 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 DESI1Q6ICB0 168 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 ZCCHC12Q6PEW1 402 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 CHERPQ8IWX8 916 aaKnown RBP16.85■□□□□ 0.29
HLA-F-220ENST00000434407 CDRT4Q8N9R6 151 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 OR4N2Q8NGD1 307 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 SFXN5Q8TD22 340 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 STON2Q8WXE9 905 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 DIO2Q92813 273 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 COL21A1Q96P44 957 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 SEC14L3Q9UDX4 400 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 NPIPA1Q9UND3 350 aa16.85■□□□□ 0.29
HLA-F-220ENST00000434407 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.85■□□□□ 0.29
HLA-F-220ENST00000434407 USP9YO00507 2555 aaPredicted RBP16.84■□□□□ 0.29
HLA-F-220ENST00000434407 LRRC3CA6NJW4 275 aa16.84■□□□□ 0.29
HLA-F-220ENST00000434407 E9PBE3 544 aa16.84■□□□□ 0.29
HLA-F-220ENST00000434407 TFECO14948 347 aaPredicted RBP16.84■□□□□ 0.29
HLA-F-220ENST00000434407 DIAPH2O60879 1101 aa16.84■□□□□ 0.29
HLA-F-220ENST00000434407 REM1O75628 298 aa16.84■□□□□ 0.29
HLA-F-220ENST00000434407 UNC5CO95185 931 aa16.84■□□□□ 0.29
HLA-F-220ENST00000434407 SNX4O95219 450 aa16.84■□□□□ 0.29
HLA-F-220ENST00000434407 PTGDSP41222 190 aa16.84■□□□□ 0.29
HLA-F-220ENST00000434407 MRPL19P49406 292 aaKnown RBP16.84■□□□□ 0.29
HLA-F-220ENST00000434407 KCNK10P57789 538 aa16.84■□□□□ 0.29
HLA-F-220ENST00000434407 SNTA1Q13424 505 aa16.84■□□□□ 0.29
HLA-F-220ENST00000434407 ELOAQ14241 798 aaKnown RBP16.84■□□□□ 0.29
HLA-F-220ENST00000434407 ZNHIT3Q15649 155 aaPredicted RBP16.84■□□□□ 0.29
HLA-F-220ENST00000434407 GSTA3Q16772 222 aa16.84■□□□□ 0.29
HLA-F-220ENST00000434407 PDCD4Q53EL6 469 aaKnown RBP16.84■□□□□ 0.29
HLA-F-220ENST00000434407 SPANXN4Q5MJ08 99 aa16.84■□□□□ 0.29
HLA-F-220ENST00000434407 TMEM198Q66K66 360 aa16.84■□□□□ 0.29
HLA-F-220ENST00000434407 NXNQ6DKJ4 435 aa16.84■□□□□ 0.29
HLA-F-220ENST00000434407 MFSD12Q6NUT3 480 aa16.84■□□□□ 0.29
HLA-F-220ENST00000434407 GFRALQ6UXV0 394 aa16.84■□□□□ 0.29
HLA-F-220ENST00000434407 WDR53Q7Z5U6 358 aaPredicted RBP16.84■□□□□ 0.29
HLA-F-220ENST00000434407 SLC22A16Q86VW1 577 aa16.84■□□□□ 0.29
HLA-F-220ENST00000434407 NODALQ96S42 347 aa16.84■□□□□ 0.29
HLA-F-220ENST00000434407 TSPAN10Q9H1Z9 355 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms