RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 DUSP18Q8NEJ0 188 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 OR7G3Q8NG95 312 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 OR11H7Q8NGC8 314 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 OR11H4Q8NGC9 324 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 FATE1Q969F0 183 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 MSLNLQ96KJ4 702 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 SECISBP2Q96T21 854 aaKnown RBP7□□□□□ -1.29
SYNPO2-203ENST00000434046 TAPBPLQ9BX59 468 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 OR10A4Q9H209 315 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 SCPEP1Q9HB40 452 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 TMEM138Q9NPI0 162 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 REV1Q9UBZ9 1251 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 IL20RAQ9UHF4 553 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 COPS3Q9UNS2 423 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 MGAT4BQ9UQ53 548 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 TMEM5Q9Y2B1 443 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 ANK1P16157 1881 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 A0A1W2PRB8 838 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 ARPC5O15511 151 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 ATG13O75143 517 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 KHDRBS3O75525 346 aaKnown RBP7□□□□□ -1.29
SYNPO2-203ENST00000434046 ABLIM3O94929 683 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 SIX6O95475 246 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 IGLV3-27P01718 113 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 PRNPP04156 253 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 RRASP10301 218 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 NR2F1P10589 423 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 PTPN6P29350 595 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 WASP42768 502 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 MTNR1AP48039 350 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 ERVK-25P63136 954 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 NTHL1P78549 312 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 MAP4K2Q12851 820 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 GPR139Q6DWJ6 353 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 PSRC1Q6PGN9 363 aaPredicted RBP7□□□□□ -1.29
SYNPO2-203ENST00000434046 IZUMO1Q8IYV9 350 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 PGBD3Q8N328 593 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 KLHL36Q8N4N3 616 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 OXR1Q8N573 874 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 FIBINQ8TAL6 211 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 SCAMP4Q969E2 229 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 ZNF436Q9C0F3 470 aaPredicted RBP7□□□□□ -1.29
SYNPO2-203ENST00000434046 HCFC1R1Q9NWW0 138 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 NUMA1Q14980 2115 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 GON4LQ3T8J9 2241 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 A0A0G2JPF8 293 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 TCRBV16S1A1N1A0A5B0 115 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 HNRNPCL3B7ZW38 293 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 GABRPO00591 440 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 CHST10O43529 356 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 MMP20O60882 483 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 PRAMEF12O95522 483 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 RLN1P04808 185 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 C8GP07360 202 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 HNRNPCL4P0DMR1 293 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 PEPDP12955 493 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 BPIP17213 487 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 PITPNBP48739 271 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 STARP49675 285 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 PSMA6P60900 246 aaKnown RBP7□□□□□ -1.29
SYNPO2-203ENST00000434046 RPS13P62277 151 aaKnown RBP7□□□□□ -1.29
SYNPO2-203ENST00000434046 HSPB3Q12988 150 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 DOC2AQ14183 400 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 ELOAQ14241 798 aaKnown RBP7□□□□□ -1.29
SYNPO2-203ENST00000434046 GNA13Q14344 377 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 LGALSLQ3ZCW2 172 aaPredicted RBP7□□□□□ -1.29
SYNPO2-203ENST00000434046 GPRC6AQ5T6X5 926 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 LINGO2Q7L985 606 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 LRRC70Q7Z2Q7 622 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 ZSCAN2Q7Z7L9 614 aaPredicted RBP7□□□□□ -1.29
SYNPO2-203ENST00000434046 LIX1LQ8IVB5 337 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 OR4F15Q8NGB8 312 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 OR8D4Q8NGM9 314 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 SORCS1Q8WY21 1168 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 TOE1Q96GM8 510 aaKnown RBP7□□□□□ -1.29
SYNPO2-203ENST00000434046 OR2M2Q96R28 347 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 RIOK2Q9BVS4 552 aaKnown RBP7□□□□□ -1.29
SYNPO2-203ENST00000434046 SPHK2Q9NRA0 654 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 EDARQ9UNE0 448 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 ASF1AQ9Y294 204 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 CCDC88CQ9P219 2028 aa7□□□□□ -1.29
SYNPO2-203ENST00000434046 SCN10AQ9Y5Y9 1956 aa6.99□□□□□ -1.29
SYNPO2-203ENST00000434046 A0A1B0GVI7 797 aa6.99□□□□□ -1.29
SYNPO2-203ENST00000434046 GMDSO60547 372 aa6.99□□□□□ -1.29
SYNPO2-203ENST00000434046 EPHX1P07099 455 aa6.99□□□□□ -1.29
SYNPO2-203ENST00000434046 GABRB1P18505 474 aa6.99□□□□□ -1.29
SYNPO2-203ENST00000434046 DDX6P26196 483 aaKnown RBP eCLIP6.99□□□□□ -1.29
SYNPO2-203ENST00000434046 MANFP55145 182 aaKnown RBP6.99□□□□□ -1.29
SYNPO2-203ENST00000434046 SMIM11AP58511 58 aa6.99□□□□□ -1.29
SYNPO2-203ENST00000434046 OC90Q02509 493 aaPredicted RBP6.99□□□□□ -1.29
SYNPO2-203ENST00000434046 SGCGQ13326 291 aa6.99□□□□□ -1.29
SYNPO2-203ENST00000434046 DOC2BQ14184 412 aa6.99□□□□□ -1.29
SYNPO2-203ENST00000434046 SLC5A12Q1EHB4 618 aa6.99□□□□□ -1.29
SYNPO2-203ENST00000434046 ZNF630Q2M218 657 aaPredicted RBP6.99□□□□□ -1.29
SYNPO2-203ENST00000434046 ZNF628Q5EBL2 1059 aa6.99□□□□□ -1.29
SYNPO2-203ENST00000434046 TCTE1Q5JU00 501 aa6.99□□□□□ -1.29
SYNPO2-203ENST00000434046 TMEM220Q6QAJ8 160 aa6.99□□□□□ -1.29
SYNPO2-203ENST00000434046 MSANTD1Q6ZTZ1 278 aa6.99□□□□□ -1.29
SYNPO2-203ENST00000434046 TRILQ7L0X0 811 aa6.99□□□□□ -1.29
SYNPO2-203ENST00000434046 ADGRG3Q86Y34 549 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms