RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 NR2F1P10589 423 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 MMP11P24347 488 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 GABRR2P28476 465 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 ETV3P41162 512 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 STAT5AP42229 794 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 MTNR1BP49286 362 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 MAN2A2P49641 1150 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 RNF144AP50876 292 aaPredicted RBP13.91□□□□□ -0.18
DDX56-205ENST00000433257 ARFIP1P53367 373 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 CTSCP53634 463 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 GAS1P54826 345 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 RPA4Q13156 261 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 TRAM2Q15035 370 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 BTBD16Q32M84 506 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 ZNF805Q5CZA5 627 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 RPS26P11Q5JNZ5 115 aaPredicted RBP13.91□□□□□ -0.18
DDX56-205ENST00000433257 LRRC28Q86X40 367 aaPredicted RBP13.91□□□□□ -0.18
DDX56-205ENST00000433257 TRIM48Q8IWZ4 208 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 LRRC17Q8N6Y2 441 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 TMEM145Q8NBT3 493 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 ANKK1Q8NFD2 765 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 SNAPC3Q92966 411 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 TM4SF18Q96CE8 201 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 RNF31Q96EP0 1072 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 DHRS9Q9BPW9 319 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 TREX2Q9BQ50 279 aaPredicted RBP13.91□□□□□ -0.18
DDX56-205ENST00000433257 FAIM2Q9BWQ8 316 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 EMC7Q9NPA0 242 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 COMMD3Q9UBI1 195 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 CD207Q9UJ71 328 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 SLC13A4Q9UKG4 626 aa13.91□□□□□ -0.18
DDX56-205ENST00000433257 ATG2AQ2TAZ0 1938 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 DENND4CQ5VZ89 1909 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 TMEM202A6NGA9 273 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 LRG1P02750 347 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 CSF2P04141 144 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 EPHX1P07099 455 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 CLEC2LP0C7M8 214 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 TIMP2P16035 220 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 DDX6P26196 483 aaKnown RBP eCLIP13.9□□□□□ -0.18
DDX56-205ENST00000433257 RBMS1P29558 406 aaKnown RBP13.9□□□□□ -0.18
DDX56-205ENST00000433257 SLC1A3P43003 542 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 ABATP80404 500 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 SHC2P98077 582 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 CYP4F8P98187 520 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 FABP5Q01469 135 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 DOC2BQ14184 412 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 C11orf74Q86VG3 221 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 C17orf64Q86WR6 236 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 FAM129CQ86XR2 697 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 ELMOD2Q8IZ81 293 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 CADM2Q8N3J6 435 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 C12orf76Q8N812 135 aaPredicted RBP13.9□□□□□ -0.18
DDX56-205ENST00000433257 MORN4Q8NDC4 146 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 NEIL3Q8TAT5 605 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 RGMAQ96B86 450 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 C7orf50Q9BRJ6 194 aaKnown RBP13.9□□□□□ -0.18
DDX56-205ENST00000433257 MS4A8Q9BY19 250 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 WASH6PQ9NQA3 447 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 ZNF275Q9NSD4 429 aaPredicted RBP13.9□□□□□ -0.18
DDX56-205ENST00000433257 EMC3Q9P0I2 261 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 IL36AQ9UHA7 158 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 CLEC4EQ9ULY5 219 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 BOLA1Q9Y3E2 137 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 CDH10Q9Y6N8 788 aa13.9□□□□□ -0.18
DDX56-205ENST00000433257 HELZP42694 1942 aaKnown RBP13.89□□□□□ -0.19
DDX56-205ENST00000433257 FAM227AF5H4B4 570 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 ITGA10O75578 1167 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 HNRNPA1P09651 372 aaKnown RBP eCLIP13.89□□□□□ -0.19
DDX56-205ENST00000433257 F8A1P23610 371 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 APEX1P27695 318 aaKnown RBP13.89□□□□□ -0.19
DDX56-205ENST00000433257 NTSP30990 170 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 MMP12P39900 470 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 CDH11P55287 796 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 RAG2P55895 527 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 ST3GAL3Q11203 375 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 FAM209AQ5JX71 171 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 CDC73Q6P1J9 531 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 BAIAP2L2Q6UXY1 529 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 IDO2Q6ZQW0 420 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 Q6ZVU0 165 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 RRM2BQ7LG56 351 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 ZER1Q7Z7L7 766 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 LUZP2Q86TE4 346 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 IQCHQ86VS3 1027 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 TPRA1Q86W33 373 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 MARCH9Q86YJ5 346 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 GID4Q8IVV7 300 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 CMTM8Q8IZV2 173 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 CHST14Q8NCH0 376 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 TTLQ8NG68 377 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 PIGXQ8TBF5 258 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 SAP130Q9H0E3 1048 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 ATP13A2Q9NQ11 1180 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 PRDM6Q9NQX0 595 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 INPP5EQ9NRR6 644 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 H2AFY2Q9P0M6 372 aaPredicted RBP13.89□□□□□ -0.19
DDX56-205ENST00000433257 TEKT2Q9UIF3 430 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 NUP50Q9UKX7 468 aa13.89□□□□□ -0.19
DDX56-205ENST00000433257 NCKAP1Q9Y2A7 1128 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms