RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 RPUSD3Q6P087 351 aaKnown RBP11.44□□□□□ -0.58
USP40-205ENST00000430158 ZCCHC12Q6PEW1 402 aa11.44□□□□□ -0.58
USP40-205ENST00000430158 OPN5Q6U736 354 aa11.44□□□□□ -0.58
USP40-205ENST00000430158 PTRH1Q86Y79 214 aaKnown RBP11.44□□□□□ -0.58
USP40-205ENST00000430158 MSRB3Q8IXL7 192 aa11.44□□□□□ -0.58
USP40-205ENST00000430158 ZNF843Q8N446 348 aa11.44□□□□□ -0.58
USP40-205ENST00000430158 SLC16A11Q8NCK7 471 aa11.44□□□□□ -0.58
USP40-205ENST00000430158 VPS37AQ8NEZ2 397 aa11.44□□□□□ -0.58
USP40-205ENST00000430158 OR56A1Q8NGH5 318 aa11.44□□□□□ -0.58
USP40-205ENST00000430158 OR4A15Q8NGL6 344 aa11.44□□□□□ -0.58
USP40-205ENST00000430158 FAM110BQ8TC76 370 aa11.44□□□□□ -0.58
USP40-205ENST00000430158 MIPOL1Q8TD10 442 aa11.44□□□□□ -0.58
USP40-205ENST00000430158 TSPEARQ8WU66 669 aa11.44□□□□□ -0.58
USP40-205ENST00000430158 HGDQ93099 445 aa11.44□□□□□ -0.58
USP40-205ENST00000430158 SPACA9Q96E40 222 aaPredicted RBP11.44□□□□□ -0.58
USP40-205ENST00000430158 MS4A4EQ96PG1 132 aa11.44□□□□□ -0.58
USP40-205ENST00000430158 HES7Q9BYE0 225 aa11.44□□□□□ -0.58
USP40-205ENST00000430158 NMUR2Q9GZQ4 415 aa11.44□□□□□ -0.58
USP40-205ENST00000430158 PAIP1Q9H074 479 aaKnown RBP11.44□□□□□ -0.58
USP40-205ENST00000430158 MYLK2Q9H1R3 596 aa11.44□□□□□ -0.58
USP40-205ENST00000430158 EPN3Q9H201 632 aa11.44□□□□□ -0.58
USP40-205ENST00000430158 RABEP2Q9H5N1 569 aa11.44□□□□□ -0.58
USP40-205ENST00000430158 C3orf14Q9HBI5 128 aa11.44□□□□□ -0.58
USP40-205ENST00000430158 ZCCHC3Q9NUD5 404 aaKnown RBP11.44□□□□□ -0.58
USP40-205ENST00000430158 CCDC167Q9P0B6 97 aa11.44□□□□□ -0.58
USP40-205ENST00000430158 LRFN1Q9P244 771 aa11.44□□□□□ -0.58
USP40-205ENST00000430158 ABI3Q9P2A4 366 aa11.44□□□□□ -0.58
USP40-205ENST00000430158 NPFFR2Q9Y5X5 522 aa11.44□□□□□ -0.58
USP40-205ENST00000430158 CHCHD2Q9Y6H1 151 aaPredicted RBP11.44□□□□□ -0.58
USP40-205ENST00000430158 NCKAP5O14513 1909 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 TRAV17A0A0B4J275 112 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 GXYLT2A0PJZ3 443 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 NME2P1O60361 137 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 IGKV1D-16P01601 117 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 SP1P08047 785 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 NME2P22392 152 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 UQCRC2P22695 453 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 TRPC1P48995 793 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 PRR5P85299 388 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 LRRC74AQ0VAA2 488 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 NFATC3Q12968 1075 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 KLF10Q13118 480 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 UBAP2LQ14157 1087 aaKnown RBP11.43□□□□□ -0.58
USP40-205ENST00000430158 ZNF169Q14929 603 aaPredicted RBP11.43□□□□□ -0.58
USP40-205ENST00000430158 NNATQ16517 81 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 DUSP5Q16690 384 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 VPS26BQ4G0F5 336 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 CYP27C1Q4G0S4 372 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 PAGE3Q5JUK9 113 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 COLEC12Q5KU26 742 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 HLA-DQA1Q5Y7H0 255 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 AP1ARQ63HQ0 302 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 DESI1Q6ICB0 168 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 SLC2A7Q6PXP3 512 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 IL20RBQ6UXL0 311 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 GK5Q6ZS86 529 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 C6orf120Q7Z4R8 191 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 RETREG3Q86VR2 466 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 SLC44A2Q8IWA5 706 aaPredicted RBP11.43□□□□□ -0.58
USP40-205ENST00000430158 PRR22Q8IZ63 422 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 TAGAPQ8N103 731 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 SLC34A3Q8N130 599 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 TMEM156Q8N614 296 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 CDRT4Q8N9R6 151 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 GOLM1Q8NBJ4 401 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 OR5AK3PQ8NH89 298 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 SLC22A8Q8TCC7 542 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 PAQR8Q8TEZ7 354 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 ASB15Q8WXK1 588 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 MOAP1Q96BY2 351 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 SPDL1Q96EA4 605 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 NEURL3Q96EH8 262 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 SLC35A4Q96G79 324 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 SGCZQ96LD1 299 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 BARD1Q99728 777 aaKnown RBP11.43□□□□□ -0.58
USP40-205ENST00000430158 DEPPQ9NTK1 212 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 GIN1Q9NXP7 522 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 SLC25A37Q9NYZ2 338 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 SLAMF8Q9P0V8 285 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 CNOT11Q9UKZ1 510 aaKnown RBP11.43□□□□□ -0.58
USP40-205ENST00000430158 SNX8Q9Y5X2 465 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 GMEB1Q9Y692 573 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 KCNE3Q9Y6H6 103 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 MYO18BQ8IUG5 2567 aa11.43□□□□□ -0.58
USP40-205ENST00000430158 ESPL1Q14674 2120 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 HEATR5AQ86XA9 2040 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 A0A096LPI6 279 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 A0A0G2JMM0 328 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 A0A1W2PP18 115 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 A0A1W2PPB8 328 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 A0A1W2PRS3 328 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 CCDC154A6NI56 674 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 A8MVJ9 347 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 KIR3DP1A8MWS1 328 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 NR5A2O00482 541 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 FBP2O00757 339 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 CFLARO15519 480 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 SUV39H1O43463 412 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 PPM1BO75688 479 aa11.42□□□□□ -0.58
USP40-205ENST00000430158 SLC25A12O75746 678 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms