RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 CD207Q9UJ71 328 aa14.62□□□□□ -0.07
PTPRF-206ENST00000429895 RASAL1O95294 804 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 IFNA1P01562 189 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 C6orf132Q5T0Z8 1188 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 BEST3Q8N1M1 668 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 LILRB2Q8N423 598 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 HORMAD2Q8N7B1 307 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 OR9A2Q8NGT5 310 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 XYLT2Q9H1B5 865 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 SLC7A7Q9UM01 511 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 NPIPA5A0A0B4J1W7 369 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 NPIPA7E9PJI5 369 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 CRTAPO75718 401 aaPredicted RBP14.61□□□□□ -0.07
PTPRF-206ENST00000429895 GABBR2O75899 941 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 ALDOAP04075 364 aaKnown RBP14.61□□□□□ -0.07
PTPRF-206ENST00000429895 NPIPA8P0DM63 369 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 ZNF791Q3KP31 576 aaPredicted RBP14.61□□□□□ -0.07
PTPRF-206ENST00000429895 TP53INP2Q8IXH6 220 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 SYT14Q8NB59 555 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 OR5AK2Q8NH90 309 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 ACTRT3Q9BYD9 372 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 WDR6Q9NNW5 1121 aaKnown RBP14.61□□□□□ -0.07
PTPRF-206ENST00000429895 ADAP00813 363 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 FDXRP22570 491 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 ETV5P41161 510 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 ART1P52961 327 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 ASRGL1Q7L266 308 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 TMEM173Q86WV6 379 aaPredicted RBP14.61□□□□□ -0.07
PTPRF-206ENST00000429895 OR2T4Q8NH00 348 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 GPR83Q9NYM4 423 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 OR52A4PA6NMU1 304 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 HTR1EP28566 365 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 FAM189BP81408 668 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 NTRK2Q16620 822 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 TEX26Q8N6G2 289 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 OR5B12Q96R08 314 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 MACROD1Q9BQ69 325 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 DPH1Q9BZG8 443 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 SYNPO2LQ9H987 977 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 PAK1IP1Q9NWT1 392 aaPredicted RBP14.61□□□□□ -0.07
PTPRF-206ENST00000429895 STYXL1Q9Y6J8 313 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 KNG1P01042 644 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 TFPTP0C1Z6 253 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 ZNF14P17017 642 aaPredicted RBP14.61□□□□□ -0.07
PTPRF-206ENST00000429895 NR4A2P43354 598 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 TMEM205Q6UW68 189 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 MRPL21Q7Z2W9 205 aaKnown RBP14.61□□□□□ -0.07
PTPRF-206ENST00000429895 APIPQ96GX9 242 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 ERVK13-1Q9NX77 482 aa14.61□□□□□ -0.07
PTPRF-206ENST00000429895 CSNK2A1P68400 391 aaPredicted RBP14.6□□□□□ -0.07
PTPRF-206ENST00000429895 RAB6CQ53S08 254 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 DUS1LQ6P1R4 473 aaKnown RBP14.6□□□□□ -0.07
PTPRF-206ENST00000429895 UNC5DQ6UXZ4 953 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 CNEP1R1Q8N9A8 125 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 CSNK2A3Q8NEV1 391 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 SPTSSAQ969W0 71 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 SAMD8Q96LT4 415 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 MYRFLQ96LU7 910 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 RAB6CQ9H0N0 254 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 B3GNT2Q9NY97 397 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 PCDHB10Q9UN67 800 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 NUDT21O43809 227 aaKnown RBP14.6□□□□□ -0.07
PTPRF-206ENST00000429895 SLC10A3P09131 477 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 CEBPBP17676 345 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 TMIEQ8NEW7 156 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 ZNF317Q96PQ6 595 aaPredicted RBP14.6□□□□□ -0.07
PTPRF-206ENST00000429895 ZNF160Q9HCG1 818 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 DNAJB11Q9UBS4 358 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 UBQLN2Q9UHD9 624 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 HMX3A6NHT5 357 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 RDH16O75452 317 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 BMP1P13497 986 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 PRKXP51817 358 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 ZNF765Q7L2R6 523 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 CENPSQ8N2Z9 138 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 WDTC1Q8N5D0 677 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 SERINC2Q96SA4 455 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 POTEKPQ9BYX7 375 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 STUB1Q9UNE7 303 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 TRIM64CA6NLI5 447 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 PHYHO14832 338 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 AMY2AP04746 511 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 LAMP1P11279 417 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 CDKN2CP42773 168 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 GSG1LQ6UXU4 331 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 ACBD7Q8N6N7 88 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 CLEC1AQ8NC01 280 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 POC1BQ8TC44 478 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 TOMM40LQ969M1 308 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 CDC6Q99741 560 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 OXSR1O95747 527 aaPredicted RBP14.6□□□□□ -0.07
PTPRF-206ENST00000429895 GDF1P27539 372 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 MAP2K3P46734 347 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 PTH2RP49190 550 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 ACY1Q03154 408 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 OR7A5Q15622 319 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 SMAD2Q15796 467 aaKnown RBP14.6□□□□□ -0.07
PTPRF-206ENST00000429895 NKPD1Q17RQ9 610 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 TMEM201Q5SNT2 666 aa14.6□□□□□ -0.07
PTPRF-206ENST00000429895 LIPIQ6XZB0 460 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms