RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 SKAP2O75563 359 aaPredicted RBP16.54■□□□□ 0.24
SSR4P1-202ENST00000429427 BCAS2O75934 225 aaPredicted RBP16.54■□□□□ 0.24
SSR4P1-202ENST00000429427 SNX4O95219 450 aa16.54■□□□□ 0.24
SSR4P1-202ENST00000429427 AGAP20933 346 aa16.54■□□□□ 0.24
SSR4P1-202ENST00000429427 PTPN6P29350 595 aa16.54■□□□□ 0.24
SSR4P1-202ENST00000429427 NTSP30990 170 aa16.54■□□□□ 0.24
SSR4P1-202ENST00000429427 FRKP42685 505 aaPredicted RBP16.54■□□□□ 0.24
SSR4P1-202ENST00000429427 TRPC1P48995 793 aa16.54■□□□□ 0.24
SSR4P1-202ENST00000429427 MAN2A2P49641 1150 aa16.54■□□□□ 0.24
SSR4P1-202ENST00000429427 XKRXQ6PP77 449 aa16.54■□□□□ 0.24
SSR4P1-202ENST00000429427 PAOXQ6QHF9 649 aa16.54■□□□□ 0.24
SSR4P1-202ENST00000429427 NUP54Q7Z3B4 507 aa16.54■□□□□ 0.24
SSR4P1-202ENST00000429427 NUDCD3Q8IVD9 361 aa16.54■□□□□ 0.24
SSR4P1-202ENST00000429427 NEIL3Q8TAT5 605 aa16.54■□□□□ 0.24
SSR4P1-202ENST00000429427 SLC35A4Q96G79 324 aa16.54■□□□□ 0.24
SSR4P1-202ENST00000429427 SORT1Q99523 831 aa16.54■□□□□ 0.24
SSR4P1-202ENST00000429427 STMN4Q9H169 189 aaPredicted RBP16.54■□□□□ 0.24
SSR4P1-202ENST00000429427 TP63Q9H3D4 680 aaPredicted RBP16.54■□□□□ 0.24
SSR4P1-202ENST00000429427 CENPHQ9H3R5 247 aa16.54■□□□□ 0.24
SSR4P1-202ENST00000429427 REEP4Q9H6H4 257 aa16.54■□□□□ 0.24
SSR4P1-202ENST00000429427 QPCTLQ9NXS2 382 aa16.54■□□□□ 0.24
SSR4P1-202ENST00000429427 TMED5Q9Y3A6 229 aa16.54■□□□□ 0.24
SSR4P1-202ENST00000429427 OR6C70A6NIJ9 312 aa16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 PDPK1O15530 556 aa16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 ICOSLGO75144 302 aa16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 PEX11AO75192 247 aa16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 TUBBP07437 444 aa16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 GDF1P27539 372 aa16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 HTR1EP28566 365 aa16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 CDK9P50750 372 aaKnown RBP16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 ZNF155Q12901 538 aaPredicted RBP16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 PTGR1Q14914 329 aa16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 CHI3L2Q15782 390 aa16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 ZNF630Q2M218 657 aaPredicted RBP16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 C6orf136Q5SQH8 315 aa16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 TMEM198Q66K66 360 aa16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 TIGD3Q6B0B8 471 aa16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 LRIG3Q6UXM1 1119 aa16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 SLC44A2Q8IWA5 706 aaPredicted RBP16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 ZNF781Q8N8C0 355 aa16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 WDSUB1Q8N9V3 476 aa16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 COL21A1Q96P44 957 aa16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 ADOQ96SZ5 270 aa16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 C1orf50Q9BV19 199 aa16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 METTL7AQ9H8H3 244 aa16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 TAS2R9Q9NYW1 312 aa16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 ACTL7BQ9Y614 415 aa16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 MED12Q93074 2177 aa16.53■□□□□ 0.24
SSR4P1-202ENST00000429427 PRAMEF25A6NGN4 478 aa16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 GNB5O14775 395 aa16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 BCKDKO14874 412 aa16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 SNPHO15079 494 aa16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 TM9SF1O15321 606 aa16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 BIRC5O15392 142 aa16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 REM1O75628 298 aa16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 SLITRK5O94991 958 aa16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 SERPINE1P05121 402 aa16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 HPNP05981 417 aa16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 PRF1P14222 555 aa16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 EFNA1P20827 205 aaPredicted RBP16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 SMSP52788 366 aa16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 NUP107P57740 925 aa16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 HSPB3Q12988 150 aa16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 BEND6Q5SZJ8 279 aaPredicted RBP16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 SP5Q6BEB4 398 aaPredicted RBP16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 ANGPTL8Q6UXH0 198 aa16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 PACS2Q86VP3 889 aa16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 EFHD2Q96C19 240 aaPredicted RBP16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 PPCDCQ96CD2 204 aa16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 OSBPL11Q9BXB4 747 aa16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 LDAHQ9H6V9 325 aa16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 DDX18Q9NVP1 670 aaKnown RBP16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 FLRT3Q9NZU0 649 aa16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 B4GALT7Q9UBV7 327 aa16.52■□□□□ 0.24
SSR4P1-202ENST00000429427 FREM3P0C091 2139 aa16.52■□□□□ 0.23
SSR4P1-202ENST00000429427 PKDREJQ9NTG1 2253 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 KDM4EB2RXH2 506 aaPredicted RBP16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 COQ9O75208 318 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 CLDN14O95500 239 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 IFI6P09912 130 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 BGNP21810 368 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 ACVR2AP27037 513 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 MAP3K8P41279 467 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 MASP1P48740 699 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 GAS1P54826 345 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 WDR4P57081 412 aaKnown RBP16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 ABCE1P61221 599 aaKnown RBP16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 CRYZQ08257 329 aaKnown RBP16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 SNTA1Q13424 505 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 EIPR1Q53HC9 387 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 DCST1Q5T197 706 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 SLC30A6Q6NXT4 461 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 ZNF585AQ6P3V2 769 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 LARP4Q71RC2 724 aaKnown RBP eCLIP16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 LIX1Q8N485 282 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 OR7A2PQ8NGA2 310 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 HOXB13Q92826 284 aaPredicted RBP16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 SDCCAG3Q96C92 435 aa16.51■□□□□ 0.23
SSR4P1-202ENST00000429427 GIMAP5Q96F15 307 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms