RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 XCR1P46094 333 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 CLDN2P57739 230 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 SLAMF1Q13291 335 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 SLC9A5Q14940 896 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 BAK1Q16611 211 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 MPEG1Q2M385 716 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 ARL9Q6T311 187 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 ZNF600Q6ZNG1 722 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 OR14C36Q8NHC7 312 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 UFD1Q92890 307 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 NXPE3Q969Y0 559 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 ZFP3Q96NJ6 502 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 FYTTD1Q96QD9 318 aaKnown RBP7.61□□□□□ -1.19
HPS4-205ENST00000429411 UCN2Q96RP3 112 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 PITX2Q99697 317 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 BCL7BQ9BQE9 202 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 TRIM45Q9H8W5 580 aaPredicted RBP7.61□□□□□ -1.19
HPS4-205ENST00000429411 RC3H2Q9HBD1 1191 aaKnown RBP7.61□□□□□ -1.19
HPS4-205ENST00000429411 RANGRFQ9HD47 186 aaPredicted RBP7.61□□□□□ -1.19
HPS4-205ENST00000429411 SLAMF7Q9NQ25 335 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 PLSCR3Q9NRY6 295 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 ZNF222Q9UK12 451 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 SATB2Q9UPW6 733 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 MGAT4BQ9UQ53 548 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 NTNG1Q9Y2I2 539 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 FAM86C2PA6NEL3 165 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 GMFGO60234 142 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 GREM1O60565 184 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 FCER2P06734 321 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 IL1RNP18510 177 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 ELAVL4P26378 380 aaKnown RBP7.6□□□□□ -1.19
HPS4-205ENST00000429411 APEX1P27695 318 aaKnown RBP7.6□□□□□ -1.19
HPS4-205ENST00000429411 TALDO1P37837 337 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 TGM3Q08188 693 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 PUM1Q14671 1186 aaKnown RBP eCLIP7.6□□□□□ -1.19
HPS4-205ENST00000429411 C2orf27AQ580R0 203 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 SNAP47Q5SQN1 464 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 AGAP6Q5VW22 663 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 ACSM5Q6NUN0 579 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 TCTN3Q6NUS6 607 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 MTFR2Q6P444 385 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 IL20RBQ6UXL0 311 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 VN1R5Q7Z5H4 357 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 LRRTM4Q86VH4 590 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 DCUN1D3Q8IWE4 304 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 OR6T1Q8NGN1 323 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 OR5P2Q8WZ92 322 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 DNAJA3Q96EY1 480 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 DTD2Q96FN9 168 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 AGAP4Q96P64 663 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 GABARAPL3Q9BY60 117 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 UBE2ZQ9H832 354 aaPredicted RBP7.6□□□□□ -1.19
HPS4-205ENST00000429411 UCKL1Q9NWZ5 548 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 SLC23A2Q9UGH3 650 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 EXO1Q9UQ84 846 aaKnown RBP7.6□□□□□ -1.19
HPS4-205ENST00000429411 NAALAD2Q9Y3Q0 740 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 PCDHGA3Q9Y5H0 932 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 CEP250Q9BV73 2442 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 TBC1D3DA0A087WVF3 549 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 TBC1D3IA0A087WXS9 549 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 TBC1D3EA0A087X179 549 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 TBC1D3KA0A087X1G2 549 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 MEIOCA2RUB1 952 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 TBC1D3FA6NER0 549 aaPredicted RBP7.6□□□□□ -1.19
HPS4-205ENST00000429411 TBC1D3LB9A6J9 549 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 RAB36O95755 333 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 ADH1CP00326 375 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 ADAP00813 363 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 TBC1D3HP0C7X1 549 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 ADRB3P13945 408 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 MYL9P24844 172 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 MMP12P39900 470 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 ERVK-21P61565 698 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 RPS25P62851 125 aaKnown RBP7.6□□□□□ -1.19
HPS4-205ENST00000429411 SLC3A1Q07837 685 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 LRRC32Q14392 662 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 INSL4Q14641 139 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 ATAD3CQ5T2N8 411 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 TBC1D3GQ6DHY5 549 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 FAM71E1Q6IPT2 247 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 TBC1D3CQ6IPX1 549 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 KLBQ86Z14 1044 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 TBC1D3Q8IZP1 549 aaPredicted RBP7.6□□□□□ -1.19
HPS4-205ENST00000429411 OR4E2Q8NGC2 313 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 SECISBP2Q96T21 854 aaKnown RBP7.6□□□□□ -1.19
HPS4-205ENST00000429411 WFDC6Q9BQY6 131 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 SLC22A4Q9H015 551 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 CRLF2Q9HC73 371 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 MYNNQ9NPC7 610 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 ZMIZ1Q9ULJ6 1067 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 STUB1Q9UNE7 303 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 ZNF780BQ9Y6R6 833 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 TCF20Q9UGU0 1960 aaKnown RBP7.6□□□□□ -1.19
HPS4-205ENST00000429411 TRPM6Q9BX84 2022 aa7.6□□□□□ -1.19
HPS4-205ENST00000429411 IGLV3-16A0A075B6K0 115 aa7.59□□□□□ -1.19
HPS4-205ENST00000429411 NPIPA5A0A0B4J1W7 369 aa7.59□□□□□ -1.19
HPS4-205ENST00000429411 C1QTNF3-AMACRE9PGA6 284 aa7.59□□□□□ -1.19
HPS4-205ENST00000429411 NPIPA7E9PJI5 369 aa7.59□□□□□ -1.19
HPS4-205ENST00000429411 SMLR1H3BR10 107 aa7.59□□□□□ -1.19
HPS4-205ENST00000429411 SLC9A3R1O14745 358 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms