RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 CHUKO15111 745 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 LATO43561 262 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 MITFO75030 526 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 S100A6P06703 90 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 P4HA1P13674 534 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 GOT1P17174 413 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 GAP43P17677 238 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 TNNI1P19237 187 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 CA6P23280 308 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 ELAVL4P26378 380 aaKnown RBP4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 NNMTP40261 264 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 FNTAP49354 379 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 HNRNPKP61978 463 aaKnown RBP eCLIP4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 CST6Q15828 149 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 IL17AQ16552 155 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 SMUG1Q53HV7 270 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 RILPL1Q5EBL4 403 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 ARMC4Q5T2S8 1044 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 BSPRYQ5W0U4 402 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 TMEM215Q68D42 235 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 PPP1R21Q6ZMI0 780 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 NCCRP1Q6ZVX7 275 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 CCDC50Q8IVM0 306 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 CCAR2Q8N163 923 aaKnown RBP4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 ARHGAP18Q8N392 663 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 SLC25A45Q8N413 288 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 MARVELD2Q8N4S9 558 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 NECAB1Q8N987 351 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 ZNF564Q8TBZ8 553 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 ZFAND2BQ8WV99 257 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 CDKL2Q92772 493 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 TMA16Q96EY4 203 aaKnown RBP4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 RBM41Q96IZ5 413 aaKnown RBP4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 LLPHQ9BRT6 129 aaKnown RBP4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 AP1M1Q9BXS5 423 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 PITPNM3Q9BZ71 974 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 ATP13A3Q9H7F0 1226 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 CSNK1G1Q9HCP0 422 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 EIF2B3Q9NR50 452 aaKnown RBP4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 ATPIF1Q9UII2 106 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 TRAF3IP3Q9Y228 551 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 MAGED1Q9Y5V3 778 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 GMEB1Q9Y692 573 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 CENPEQ02224 2701 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 UNC13CQ8NB66 2214 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 CRYBG3Q68DQ2 2970 aa4.1□□□□□ -1.75
HMGB3P5-201ENST00000428894 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 GOLGA6L7A0A1B0GV03 622 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 HYKKA2RU49 373 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 GOLGA8IPA6NC78 632 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 GOLGA8JA6NMD2 632 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 NVLO15381 856 aaKnown RBP4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 SLC7A4O43246 635 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 STX6O43752 255 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 JAK2O60674 1132 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 SDC3O75056 442 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 ZNF254O75437 659 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 CLDN1O95832 211 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 LIPCP11150 499 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 IDO1P14902 403 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 CD82P27701 267 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 SHC1P29353 583 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 HLA-FP30511 346 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 AP3M2P53677 418 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 MAP3K7CLP57077 242 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 BPIFB3P59826 476 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 ZNF177Q13360 481 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 SNX1Q13596 522 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 PPP1R7Q15435 360 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 HNRNPA1L2Q32P51 320 aaKnown RBP4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 KLHL26Q53HC5 615 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 MPP7Q5T2T1 576 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 FHL5Q5TD97 284 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 FAM46CQ5VWP2 391 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 NEK5Q6P3R8 708 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 CCDC121Q6ZUS5 278 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 PAQR9Q6ZVX9 377 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 RSRC2Q7L4I2 434 aaKnown RBP4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 SH2D6Q7Z4S9 175 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 LRRTM1Q86UE6 522 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 ADIPOR2Q86V24 386 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 UNC93AQ86WB7 457 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 COMMD2Q86X83 199 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 MMAAQ8IVH4 418 aaKnown RBP4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 OR8H2Q8N162 312 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 FBXO39Q8N4B4 442 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 OR5AP2Q8NGF4 316 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 OR5B17Q8NGF7 314 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 OR13J1Q8NGT2 312 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 RAD54LQ92698 747 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 TMEM159Q96B96 161 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 ATXN7L3BQ96GX2 97 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 CABS1Q96KC9 395 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 C16orf45Q96MC5 204 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 CATSPER2Q96P56 530 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 RTN4RQ9BZR6 473 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 STRADBQ9C0K7 418 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 DPEP3Q9H4B8 488 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 ABCB8Q9NUT2 735 aa4.09□□□□□ -1.75
HMGB3P5-201ENST00000428894 FKBP14Q9NWM8 211 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms