RNA–Protein interactions for RNA: ENST00000427862.1

GCFC2-203, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-203ENST00000427862 SNX1Q13596 522 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 KARSQ15046 597 aaKnown RBP3.6□□□□□ -1.83
GCFC2-203ENST00000427862 MICAQ29983 383 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 PARP6Q2NL67 630 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 PARP10Q53GL7 1025 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 PNCKQ6P2M8 343 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 LEG1Q6P5S2 330 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 HACD2Q6Y1H2 254 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 GCNT7Q6ZNI0 430 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 SPAG16Q8N0X2 631 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 FBXL16Q8N461 479 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 HDDC3Q8N4P3 179 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 OR56B1Q8NGI3 324 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 MRAPQ8TCY5 172 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 U2AF1L4Q8WU68 220 aaKnown RBP3.6□□□□□ -1.83
GCFC2-203ENST00000427862 MCHR2Q969V1 340 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 SLC25A36Q96CQ1 311 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 FAM111AQ96PZ2 611 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 TSPAN18Q96SJ8 248 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 NMNAT2Q9BZQ4 307 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 PNNQ9H307 717 aaKnown RBP3.6□□□□□ -1.83
GCFC2-203ENST00000427862 TMEM231Q9H6L2 316 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 MEPEQ9NQ76 525 aaPredicted RBP3.6□□□□□ -1.83
GCFC2-203ENST00000427862 FAM120CQ9NX05 1096 aaKnown RBP3.6□□□□□ -1.83
GCFC2-203ENST00000427862 IMPAD1Q9NX62 359 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 PLA2G4CQ9UP65 541 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 CUX2O14529 1486 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 RNF103-CHMP3A0A140T963 221 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 RNF222A6NCQ9 220 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 FRG2CA6NGY1 282 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 NPIPA2E9PIF3 369 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 H0YL77 283 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 GJB5O95377 273 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 PRAMEF12O95522 483 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 ALPIP09923 528 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 ERVPABLB-1P60509 514 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 CXCL6P80162 114 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 MRPS6P82932 125 aaKnown RBP3.59□□□□□ -1.83
GCFC2-203ENST00000427862 ZP4Q12836 540 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 BNIP1Q12981 228 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 LDLRAP1Q5SW96 308 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 UTF1Q5T230 341 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 CNSTQ6PJW8 725 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 PAMR1Q6UXH9 720 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 BAIAP2L2Q6UXY1 529 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 ZNF562Q6V9R5 426 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 UNC5CLQ8IV45 518 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 FAM71CQ8NEG0 241 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 NCLNQ969V3 563 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 ADIPOR1Q96A54 375 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 C9orf85Q96MD7 179 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.59□□□□□ -1.83
GCFC2-203ENST00000427862 DCAF13Q9NV06 445 aaKnown RBP3.59□□□□□ -1.83
GCFC2-203ENST00000427862 P2RX2Q9UBL9 471 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 BCAP29Q9UHQ4 241 aa3.59□□□□□ -1.83
GCFC2-203ENST00000427862 C11orf98E9PRG8 122 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 PRPSAP2O60256 369 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 NDUFA7O95182 113 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 RALAP11233 206 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 ARHGDIBP52566 201 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 KRTAP10-3P60369 221 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 HERVK_113P63132 956 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 ERVK-8P63133 956 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 NOP14P78316 857 aaKnown RBP3.58□□□□□ -1.84
GCFC2-203ENST00000427862 SRYQ05066 204 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 PEX6Q13608 980 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 RFTN1Q14699 578 aaPredicted RBP3.58□□□□□ -1.84
GCFC2-203ENST00000427862 CEBPEQ15744 281 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 NET1Q7Z628 596 aaPredicted RBP3.58□□□□□ -1.84
GCFC2-203ENST00000427862 TSEN54Q7Z6J9 526 aaKnown RBP3.58□□□□□ -1.84
GCFC2-203ENST00000427862 ADCK1Q86TW2 530 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 CENPSQ8N2Z9 138 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 CD177Q8N6Q3 437 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 CNNM3Q8NE01 707 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 NFAM1Q8NET5 270 aaPredicted RBP3.58□□□□□ -1.84
GCFC2-203ENST00000427862 RFESDQ8TAC1 157 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 PPP1R16AQ96I34 528 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 CCT8L2Q96SF2 557 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 ERVK-6Q9BXR3 956 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 TIGARQ9NQ88 270 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 GHRLQ9UBU3 117 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 ZNF490Q9ULM2 529 aaPredicted RBP3.58□□□□□ -1.84
GCFC2-203ENST00000427862 NTNG1Q9Y2I2 539 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 DHRS7Q9Y394 339 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 CLCA3PQ9Y6N3 262 aa3.58□□□□□ -1.84
GCFC2-203ENST00000427862 IGLV3-10A0A075B6K4 115 aa3.57□□□□□ -1.84
GCFC2-203ENST00000427862 IGHV3-35A0A0C4DH35 117 aa3.57□□□□□ -1.84
GCFC2-203ENST00000427862 FAM168BA1KXE4 195 aa3.57□□□□□ -1.84
GCFC2-203ENST00000427862 FBLL1A6NHQ2 334 aaKnown RBP3.57□□□□□ -1.84
GCFC2-203ENST00000427862 EFCAB7A8K855 629 aa3.57□□□□□ -1.84
GCFC2-203ENST00000427862 ABCC4O15439 1325 aa3.57□□□□□ -1.84
GCFC2-203ENST00000427862 SSX5O60225 188 aa3.57□□□□□ -1.84
GCFC2-203ENST00000427862 SLC2A10O95528 541 aa3.57□□□□□ -1.84
GCFC2-203ENST00000427862 APBB3O95704 486 aa3.57□□□□□ -1.84
GCFC2-203ENST00000427862 SLC35G4P0C7Q5 338 aa3.57□□□□□ -1.84
GCFC2-203ENST00000427862 SLC35E2P0CK97 266 aa3.57□□□□□ -1.84
GCFC2-203ENST00000427862 PGAM2P15259 253 aa3.57□□□□□ -1.84
GCFC2-203ENST00000427862 TSPAN8P19075 237 aa3.57□□□□□ -1.84
GCFC2-203ENST00000427862 IL10P22301 178 aa3.57□□□□□ -1.84
GCFC2-203ENST00000427862 DNAJB1P25685 340 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms