RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 SLC6A5Q9Y345 797 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 RPS24P62847 133 aaKnown RBP13.76□□□□□ -0.21
PTPN13-203ENST00000427191 CSNK2A1P68400 391 aaPredicted RBP13.76□□□□□ -0.21
PTPN13-203ENST00000427191 RING1Q06587 406 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 KBTBD6Q86V97 674 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 CSNK2A3Q8NEV1 391 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 SLC19A3Q9BZV2 496 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 CERS4Q9HA82 394 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 KCNIP2Q9NS61 270 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 C11orf98E9PRG8 122 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 SCAMP2O15127 329 aaKnown RBP13.75□□□□□ -0.21
PTPN13-203ENST00000427191 SNAP29O95721 258 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 ALDOAP04075 364 aaKnown RBP13.75□□□□□ -0.21
PTPN13-203ENST00000427191 PCGF3Q3KNV8 242 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 OR2T35Q8NGX2 323 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 SMAP2Q8WU79 429 aaPredicted RBP13.75□□□□□ -0.21
PTPN13-203ENST00000427191 ESAMQ96AP7 390 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 OR1F2PQ96R84 312 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 YIPF1Q9Y548 306 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 A0A0G2JN53 185 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 TMEM233B4DJY2 109 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 KCNE1P15382 129 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 SRPXP78539 464 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 INCA1Q0VD86 236 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 PON2Q15165 354 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 RAB30Q15771 203 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 LRFN4Q6PJG9 635 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 CYS1Q717R9 158 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 MTMR14Q8NCE2 650 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 MMABQ96EY8 250 aaPredicted RBP13.75□□□□□ -0.21
PTPN13-203ENST00000427191 IRS2Q9Y4H2 1338 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 LOC102723532A0A0G2JNH3 316 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 UNCXA6NJT0 531 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 JMJD7P0C870 316 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 NFYAP23511 347 aaPredicted RBP13.75□□□□□ -0.21
PTPN13-203ENST00000427191 GLO1Q04760 184 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 KDELC1Q6UW63 502 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 ADAMTS16Q8TE57 1224 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 KLHDC7BQ96G42 594 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 PAPOLGQ9BWT3 736 aaKnown RBP13.75□□□□□ -0.21
PTPN13-203ENST00000427191 MROH1Q8NDA8 1641 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 URB1O60287 2271 aaKnown RBP13.75□□□□□ -0.21
PTPN13-203ENST00000427191 LOC102725191A0A1B0GVB3 256 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 EEF1E1-BLOC1S5C9J1V9 151 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 ATP6V1G2-DDX39BF2Z307 99 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 ADAM10O14672 748 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 OLFM2O95897 454 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 SCAPQ12770 1279 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 TXNDC5Q8NBS9 432 aaKnown RBP13.75□□□□□ -0.21
PTPN13-203ENST00000427191 NAXEQ8NCW5 288 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 ZNF689Q96CS4 500 aaPredicted RBP13.75□□□□□ -0.21
PTPN13-203ENST00000427191 OR51B5Q9H339 312 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 PLCXD1Q9NUJ7 323 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 RAB3AP20336 220 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 PRPH2P23942 346 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 CX3CR1P49238 355 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 DHPSP49366 369 aaPredicted RBP13.75□□□□□ -0.21
PTPN13-203ENST00000427191 CNKSR3Q6P9H4 555 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 ARHGAP9Q9BRR9 750 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 PITHD1Q9GZP4 211 aaPredicted RBP13.75□□□□□ -0.21
PTPN13-203ENST00000427191 MTHFD2LQ9H903 347 aaPredicted RBP13.75□□□□□ -0.21
PTPN13-203ENST00000427191 SYT7O43581 403 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 BMP2P12643 396 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 HOXB2P14652 356 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 PRKACAP17612 351 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 KDELR2P33947 212 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 TMEM115Q12893 351 aaPredicted RBP13.75□□□□□ -0.21
PTPN13-203ENST00000427191 SSX2Q16385 188 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 TIGD5Q53EQ6 642 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 CES4AQ5XG92 561 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 OR9A2Q8NGT5 310 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 TRMT10AQ8TBZ6 339 aaKnown RBP13.75□□□□□ -0.21
PTPN13-203ENST00000427191 ZNF286AQ9HBT8 521 aa13.75□□□□□ -0.21
PTPN13-203ENST00000427191 SULT1B1O43704 296 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 HBE1P02100 147 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 CLDN8P56748 225 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 CATSPEREQ5SY80 951 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 ELP2Q6IA86 826 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 UEVLDQ8IX04 471 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 OR5L1Q8NGL2 311 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 NPAP1Q9NZP6 1156 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 GPR160Q9UJ42 338 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 SLC22A7Q9Y694 548 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 ZNF536O15090 1300 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 IFT172Q9UG01 1749 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 EGFP01133 1207 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 ZNF92Q03936 586 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 OR6Q1Q8NGQ2 317 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 METTL2AQ96IZ6 378 aaKnown RBP13.74□□□□□ -0.21
PTPN13-203ENST00000427191 SNX18Q96RF0 628 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 GON7Q9BXV9 100 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 PRMT8Q9NR22 394 aaPredicted RBP13.74□□□□□ -0.21
PTPN13-203ENST00000427191 NENFQ9UMX5 172 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 SPO11Q9Y5K1 396 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 FAM208AQ9UK61 1670 aaKnown RBP13.74□□□□□ -0.21
PTPN13-203ENST00000427191 CXorf49A8MYA2 514 aaPredicted RBP13.74□□□□□ -0.21
PTPN13-203ENST00000427191 ELNP15502 786 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 GMPRP36959 345 aa13.74□□□□□ -0.21
PTPN13-203ENST00000427191 EIF2DP41214 584 aaKnown RBP13.74□□□□□ -0.21
PTPN13-203ENST00000427191 DEFA6Q01524 100 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms