RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 RNF138Q8WVD3 245 aa16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 CIDECQ96AQ7 238 aaPredicted RBP16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 SARAFQ96BY9 339 aa16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 COL21A1Q96P44 957 aa16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 TSSK3Q96PN8 268 aa16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 ADOQ96SZ5 270 aa16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 CCT7Q99832 543 aa16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 TTYH2Q9BSA4 534 aa16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 METTL7AQ9H8H3 244 aa16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 ZNF395Q9H8N7 513 aaPredicted RBP16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 EML4Q9HC35 981 aaKnown RBP16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 TAS2R9Q9NYW1 312 aa16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 SENP1Q9P0U3 644 aa16.75■□□□□ 0.27
SMARCAL1-205ENST00000425815 NOTCH2Q04721 2471 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 B4DXG7 233 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 RGS16O15492 202 aaPredicted RBP16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 CTIFO43310 598 aaKnown RBP16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 AKAP10O43572 662 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 TBX19O60806 448 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 TRAPPC6AO75865 159 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 CHEK2O96017 543 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 GLI4P10075 376 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 BCKDHAP12694 445 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 SERPINB5P36952 375 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 RPL38P63173 70 aaKnown RBP16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 SNTA1Q13424 505 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 PDE7AQ13946 482 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 GALNTL6Q49A17 601 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 EIPR1Q53HC9 387 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 SLC44A2Q8IWA5 706 aaPredicted RBP16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 DDIASQ8IXT1 998 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 ACBD4Q8NC06 268 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 LILRB4Q8NHJ6 448 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 CLHC1Q8NHS4 586 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 RND1Q92730 232 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 ZNF764Q96H86 408 aaPredicted RBP16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 PKNOX2Q96KN3 472 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 ZIM3Q96PE6 472 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 TIMP4Q99727 224 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 UCK2Q9BZX2 261 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 REEP4Q9H6H4 257 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 EXO5Q9H790 373 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 B4GALT7Q9UBV7 327 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 TMED5Q9Y3A6 229 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 ZNF407Q9C0G0 2248 aa16.74■□□□□ 0.27
SMARCAL1-205ENST00000425815 SNPHO15079 494 aa16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 ITM2AO43736 263 aa16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 SLITRK5O94991 958 aa16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 DHRS4L1P0CG22 281 aa16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 NTSP30990 170 aa16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 FRKP42685 505 aaPredicted RBP16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 SERPINB4P48594 390 aa16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 MASP1P48740 699 aa16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 GAS1P54826 345 aa16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 CRYZQ08257 329 aaKnown RBP16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 GAB1Q13480 694 aa16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 WLSQ5T9L3 541 aa16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 ANGPTL8Q6UXH0 198 aa16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 SEM1Q6ZVN7 128 aa16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 WDR53Q7Z5U6 358 aaPredicted RBP16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 NUDCD3Q8IVD9 361 aa16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 OR1J4Q8NGS1 313 aa16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 CA5BP1Q8WTZ4 195 aa16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 NUDT8Q8WV74 236 aa16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 OSBPL11Q9BXB4 747 aa16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 C20orf27Q9GZN8 174 aa16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 SSU72Q9NP77 194 aaKnown RBP16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 ALKBH4Q9NXW9 302 aa16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 COQ3Q9NZJ6 369 aa16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 SLC6A5Q9Y345 797 aa16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 FBN2P35556 2912 aa16.73■□□□□ 0.27
SMARCAL1-205ENST00000425815 ADGRG4Q8IZF6 3080 aa16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 PCNX1Q96RV3 2341 aa16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 WDR91A4D1P6 747 aa16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 PRAMEF25A6NGN4 478 aa16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 FIGNL2A6NMB9 653 aa16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 C17orf51A8MQB3 221 aa16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 KDM4EB2RXH2 506 aaPredicted RBP16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 WDR1O75083 606 aa16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 PEX11AO75192 247 aa16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 COQ9O75208 318 aa16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 LYPLA1O75608 230 aaPredicted RBP16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 SNRPB2P08579 225 aaKnown RBP16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 ADH7P40394 386 aa16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 PNLIPRP2P54317 469 aa16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 TFF3Q07654 80 aa16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 NHSL2Q5HYW2 709 aa16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 WIPI1Q5MNZ9 446 aaPredicted RBP16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 VASNQ6EMK4 673 aa16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 B3GNT6Q6ZMB0 384 aa16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 ACAD11Q709F0 780 aa16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 LARP4Q71RC2 724 aaKnown RBP eCLIP16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 LIX1LQ8IVB5 337 aa16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 ULK2Q8IYT8 1036 aa16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 ZNF295-AS1Q8N0V1 137 aa16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 HOXB13Q92826 284 aaPredicted RBP16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 TMCO6Q96DC7 493 aa16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 PCDHGB3Q9Y5G1 929 aa16.72■□□□□ 0.27
SMARCAL1-205ENST00000425815 A0A0G2JNJ9 132 aa16.71■□□□□ 0.27
SMARCAL1-205ENST00000425815 ABCB7O75027 752 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms