RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 ACSS1Q9NUB1 689 aaPredicted RBP16.91■□□□□ 0.3
MSH5-207ENST00000425703 DDX18Q9NVP1 670 aaKnown RBP16.91■□□□□ 0.3
MSH5-207ENST00000425703 C15orf41Q9Y2V0 281 aa16.91■□□□□ 0.3
MSH5-207ENST00000425703 HRH3Q9Y5N1 445 aa16.91■□□□□ 0.3
MSH5-207ENST00000425703 ZNF407Q9C0G0 2248 aa16.9■□□□□ 0.3
MSH5-207ENST00000425703 FIGNL2A6NMB9 653 aa16.9■□□□□ 0.3
MSH5-207ENST00000425703 TSPAN2O60636 221 aa16.9■□□□□ 0.3
MSH5-207ENST00000425703 LYPLA1O75608 230 aaPredicted RBP16.9■□□□□ 0.3
MSH5-207ENST00000425703 LRATO95237 230 aa16.9■□□□□ 0.3
MSH5-207ENST00000425703 HPNP05981 417 aa16.9■□□□□ 0.3
MSH5-207ENST00000425703 HOXD4P09016 255 aaPredicted RBP16.9■□□□□ 0.3
MSH5-207ENST00000425703 GDF1P27539 372 aa16.9■□□□□ 0.3
MSH5-207ENST00000425703 KRT20P35900 424 aa16.9■□□□□ 0.3
MSH5-207ENST00000425703 DCTP40126 519 aa16.9■□□□□ 0.3
MSH5-207ENST00000425703 PNLIPRP2P54317 469 aa16.9■□□□□ 0.3
MSH5-207ENST00000425703 CORO7P57737 925 aa16.9■□□□□ 0.3
MSH5-207ENST00000425703 ABCE1P61221 599 aaKnown RBP16.9■□□□□ 0.3
MSH5-207ENST00000425703 PSG6Q00889 435 aa16.9■□□□□ 0.3
MSH5-207ENST00000425703 MPP2Q14168 576 aa16.9■□□□□ 0.3
MSH5-207ENST00000425703 SMU1Q2TAY7 513 aa16.9■□□□□ 0.3
MSH5-207ENST00000425703 CYP27C1Q4G0S4 372 aa16.9■□□□□ 0.3
MSH5-207ENST00000425703 C6orf136Q5SQH8 315 aa16.9■□□□□ 0.3
MSH5-207ENST00000425703 BEND6Q5SZJ8 279 aaPredicted RBP16.9■□□□□ 0.3
MSH5-207ENST00000425703 HIST2H2BCQ6DN03 193 aa16.9■□□□□ 0.3
MSH5-207ENST00000425703 C3P1Q6ZMU1 363 aa16.9■□□□□ 0.3
MSH5-207ENST00000425703 NEIL3Q8TAT5 605 aa16.9■□□□□ 0.3
MSH5-207ENST00000425703 C3orf30Q96M34 536 aa16.9■□□□□ 0.3
MSH5-207ENST00000425703 NODALQ96S42 347 aa16.9■□□□□ 0.3
MSH5-207ENST00000425703 OSBPL11Q9BXB4 747 aa16.9■□□□□ 0.3
MSH5-207ENST00000425703 KCNK9Q9NPC2 374 aa16.9■□□□□ 0.3
MSH5-207ENST00000425703 BAIAP2L1Q9UHR4 511 aa16.9■□□□□ 0.3
MSH5-207ENST00000425703 NOTCH2Q04721 2471 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 PRAMEF25A6NGN4 478 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 PRSS44E7EML9 344 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 AKAP10O43572 662 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 WDR1O75083 606 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 ICOSLGO75144 302 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 PEX11AO75192 247 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 REM1O75628 298 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 PRPS2P11908 318 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 COL8A1P27658 744 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 HPCAL1P37235 193 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 CDK9P50750 372 aaKnown RBP16.89■□□□□ 0.29
MSH5-207ENST00000425703 SLC18A1P54219 525 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 ZNF155Q12901 538 aaPredicted RBP16.89■□□□□ 0.29
MSH5-207ENST00000425703 MAD2L1Q13257 205 aaPredicted RBP16.89■□□□□ 0.29
MSH5-207ENST00000425703 MLC1Q15049 377 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 ZNHIT3Q15649 155 aaPredicted RBP16.89■□□□□ 0.29
MSH5-207ENST00000425703 ZNF630Q2M218 657 aaPredicted RBP16.89■□□□□ 0.29
MSH5-207ENST00000425703 CES4AQ5XG92 561 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 ACAD11Q709F0 780 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 SLC44A2Q8IWA5 706 aaPredicted RBP16.89■□□□□ 0.29
MSH5-207ENST00000425703 NATD1Q8N6N6 113 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 RNF138Q8WVD3 245 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 LMF2Q9BU23 707 aaKnown RBP16.89■□□□□ 0.29
MSH5-207ENST00000425703 EXO5Q9H790 373 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 CHST11Q9NPF2 352 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 PNPLA3Q9NST1 481 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 KLRF1Q9NZS2 232 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 SH3BP4Q9P0V3 963 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 NTMQ9P121 344 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 ATP6V1HQ9UI12 483 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 HAO1Q9UJM8 370 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 ACAD8Q9UKU7 415 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 RAP2CQ9Y3L5 183 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 OR10H1Q9Y4A9 318 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 CENPEQ02224 2701 aa16.89■□□□□ 0.29
MSH5-207ENST00000425703 NCOA6Q14686 2063 aaPredicted RBP16.89■□□□□ 0.29
MSH5-207ENST00000425703 PCNX1Q96RV3 2341 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 DNAJC13O75165 2243 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 WDR91A4D1P6 747 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 SNPHO15079 494 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 SCAMP2O15127 329 aaKnown RBP16.88■□□□□ 0.29
MSH5-207ENST00000425703 ITM2AO43736 263 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 SKAP2O75563 359 aaPredicted RBP16.88■□□□□ 0.29
MSH5-207ENST00000425703 CLDN14O95500 239 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 ENDOUP21128 410 aaKnown RBP16.88■□□□□ 0.29
MSH5-207ENST00000425703 ACVR2AP27037 513 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 PTPN6P29350 595 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 IL12BP29460 328 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 PTGDSP41222 190 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 MANFP55145 182 aaKnown RBP16.88■□□□□ 0.29
MSH5-207ENST00000425703 ZNF385BQ569K4 471 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 WLSQ5T9L3 541 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 ANKRD26P1Q6NSI1 321 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 LARP4Q71RC2 724 aaKnown RBP eCLIP16.88■□□□□ 0.29
MSH5-207ENST00000425703 ZNF551Q7Z340 670 aaPredicted RBP16.88■□□□□ 0.29
MSH5-207ENST00000425703 LIX1Q8N485 282 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 FNDC5Q8NAU1 212 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 OR1J4Q8NGS1 313 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 CEP70Q8NHQ1 597 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 CLHC1Q8NHS4 586 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 DTNBP1Q96EV8 351 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 GNRHR2Q96P88 292 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 ADOQ96SZ5 270 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 Q9N2J8 555 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 ASIC5Q9NY37 505 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 COQ3Q9NZJ6 369 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 SPRR3Q9UBC9 169 aa16.88■□□□□ 0.29
MSH5-207ENST00000425703 MRTO4Q9UKD2 239 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms