RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 SLC18A1P54219 525 aa16.39■□□□□ 0.21
IGHV3-47-201ENST00000425060 PSPHP78330 225 aa16.39■□□□□ 0.21
IGHV3-47-201ENST00000425060 GXYLT1Q4G148 440 aa16.39■□□□□ 0.21
IGHV3-47-201ENST00000425060 ATP6AP1LQ52LC2 224 aa16.39■□□□□ 0.21
IGHV3-47-201ENST00000425060 RPTNQ6XPR3 784 aa16.39■□□□□ 0.21
IGHV3-47-201ENST00000425060 C3P1Q6ZMU1 363 aa16.39■□□□□ 0.21
IGHV3-47-201ENST00000425060 NCCRP1Q6ZVX7 275 aaPredicted RBP16.39■□□□□ 0.21
IGHV3-47-201ENST00000425060 MRGPRGQ86SM5 289 aa16.39■□□□□ 0.21
IGHV3-47-201ENST00000425060 CD163Q86VB7 1156 aa16.39■□□□□ 0.21
IGHV3-47-201ENST00000425060 ZNF808Q8N4W9 903 aaPredicted RBP16.39■□□□□ 0.21
IGHV3-47-201ENST00000425060 OR4N2Q8NGD1 307 aa16.39■□□□□ 0.21
IGHV3-47-201ENST00000425060 RNF138Q8WVD3 245 aa16.39■□□□□ 0.21
IGHV3-47-201ENST00000425060 PPCDCQ96CD2 204 aa16.39■□□□□ 0.21
IGHV3-47-201ENST00000425060 TMEM41AQ96HV5 264 aa16.39■□□□□ 0.21
IGHV3-47-201ENST00000425060 ZNF597Q96LX8 424 aa16.39■□□□□ 0.21
IGHV3-47-201ENST00000425060 SH3BP4Q9P0V3 963 aa16.39■□□□□ 0.21
IGHV3-47-201ENST00000425060 NTMQ9P121 344 aa16.39■□□□□ 0.21
IGHV3-47-201ENST00000425060 NPIPA2E9PIF3 369 aa16.38■□□□□ 0.21
IGHV3-47-201ENST00000425060 NPIPA3F8WFD2 350 aa16.38■□□□□ 0.21
IGHV3-47-201ENST00000425060 SNUPNO95149 360 aaKnown RBP16.38■□□□□ 0.21
IGHV3-47-201ENST00000425060 PRPS2P11908 318 aa16.38■□□□□ 0.21
IGHV3-47-201ENST00000425060 AGAP20933 346 aa16.38■□□□□ 0.21
IGHV3-47-201ENST00000425060 MAPK1P28482 360 aa16.38■□□□□ 0.21
IGHV3-47-201ENST00000425060 SNTA1Q13424 505 aa16.38■□□□□ 0.21
IGHV3-47-201ENST00000425060 ART3Q13508 389 aa16.38■□□□□ 0.21
IGHV3-47-201ENST00000425060 IL23RQ5VWK5 629 aa16.38■□□□□ 0.21
IGHV3-47-201ENST00000425060 SLC30A6Q6NXT4 461 aa16.38■□□□□ 0.21
IGHV3-47-201ENST00000425060 PACS2Q86VP3 889 aa16.38■□□□□ 0.21
IGHV3-47-201ENST00000425060 LIX1Q8N485 282 aa16.38■□□□□ 0.21
IGHV3-47-201ENST00000425060 MARVELD2Q8N4S9 558 aa16.38■□□□□ 0.21
IGHV3-47-201ENST00000425060 HOXB13Q92826 284 aaPredicted RBP16.38■□□□□ 0.21
IGHV3-47-201ENST00000425060 JSRP1Q96MG2 331 aaPredicted RBP16.38■□□□□ 0.21
IGHV3-47-201ENST00000425060 COL21A1Q96P44 957 aa16.38■□□□□ 0.21
IGHV3-47-201ENST00000425060 C1orf50Q9BV19 199 aa16.38■□□□□ 0.21
IGHV3-47-201ENST00000425060 ACSS1Q9NUB1 689 aaPredicted RBP16.38■□□□□ 0.21
IGHV3-47-201ENST00000425060 TRGV5A0A0B4J1U4 118 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 TMEM120BA0PK00 339 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 SCAMP2O15127 329 aaKnown RBP16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 ABCB7O75027 752 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 ICOSLGO75144 302 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 REM1O75628 298 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 HPNP05981 417 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 MAP3K8P41279 467 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 MAN2A2P49641 1150 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 RPL14P50914 215 aaKnown RBP16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 PNLIPRP2P54317 469 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 BST1Q10588 318 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 STX3Q13277 289 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 PTGR1Q14914 329 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 SMU1Q2TAY7 513 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 TIGD3Q6B0B8 471 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 XKRXQ6PP77 449 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 R3HCC1LQ7Z5L2 792 aaKnown RBP16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 SLC44A2Q8IWA5 706 aaPredicted RBP16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 RIMKLAQ8IXN7 391 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 FNDC5Q8NAU1 212 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 TUBGCP3Q96CW5 907 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 ZBED6CLQ96FA7 236 aaPredicted RBP16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 GNRHR2Q96P88 292 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 ADOQ96SZ5 270 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 LMF2Q9BU23 707 aaKnown RBP16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 TP63Q9H3D4 680 aaPredicted RBP16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 PNPLA3Q9NST1 481 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 DDX18Q9NVP1 670 aaKnown RBP16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 SPRR3Q9UBC9 169 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 TNFRSF10DQ9UBN6 386 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 C15orf41Q9Y2V0 281 aa16.37■□□□□ 0.21
IGHV3-47-201ENST00000425060 FREM3P0C091 2139 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 BCKDKO14874 412 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 PTPN6P29350 595 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 CDK9P50750 372 aaKnown RBP16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 MANFP55145 182 aaKnown RBP16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 MAGOHP61326 146 aaKnown RBP16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 EMX2Q04743 252 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 ZNF155Q12901 538 aaPredicted RBP16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 HSPB3Q12988 150 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 GAB1Q13480 694 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 CASP8Q14790 479 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 MLC1Q15049 377 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 CDSNQ15517 529 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 CYP27C1Q4G0S4 372 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 EID3Q8N140 333 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 RPRMLQ8N4K4 120 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 ANKRD42Q8N9B4 389 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 WDSUB1Q8N9V3 476 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 OR7A2PQ8NGA2 310 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 NEIL3Q8TAT5 605 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 NUDT8Q8WV74 236 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 COQ8BQ96D53 544 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 TMCO6Q96DC7 493 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 GIMAP5Q96F15 307 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 OSBPL11Q9BXB4 747 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 SLC6A15Q9H2J7 730 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 LDAHQ9H6V9 325 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 METTL7AQ9H8H3 244 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 GALNT9Q9HCQ5 603 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 ASIC5Q9NY37 505 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 B4GALT7Q9UBV7 327 aa16.36■□□□□ 0.21
IGHV3-47-201ENST00000425060 PRAMEF25A6NGN4 478 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms