RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 GNRHR2Q96P88 292 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 STMN4Q9H169 189 aaPredicted RBP16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 LDAHQ9H6V9 325 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 GALNT9Q9HCQ5 603 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 SSU72Q9NP77 194 aaKnown RBP16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 C19orf53Q9UNZ5 99 aaPredicted RBP16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 C15orf41Q9Y2V0 281 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 FAM215AQ9Y5M1 114 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 GNB5O14775 395 aa16.3■□□□□ 0.2
SBDSP1-202ENST00000423945 BCKDKO14874 412 aa16.3■□□□□ 0.2
SBDSP1-202ENST00000423945 ICOSLGO75144 302 aa16.3■□□□□ 0.2
SBDSP1-202ENST00000423945 CLDN14O95500 239 aa16.3■□□□□ 0.2
SBDSP1-202ENST00000423945 BCKDHAP12694 445 aa16.3■□□□□ 0.2
SBDSP1-202ENST00000423945 GDF1P27539 372 aa16.3■□□□□ 0.2
SBDSP1-202ENST00000423945 PTPN6P29350 595 aa16.3■□□□□ 0.2
SBDSP1-202ENST00000423945 NTSP30990 170 aa16.3■□□□□ 0.2
SBDSP1-202ENST00000423945 NUP107P57740 925 aa16.3■□□□□ 0.2
SBDSP1-202ENST00000423945 OR2L13Q8N349 312 aa16.3■□□□□ 0.2
SBDSP1-202ENST00000423945 NEIL3Q8TAT5 605 aa16.3■□□□□ 0.2
SBDSP1-202ENST00000423945 ELP4Q96EB1 424 aa16.3■□□□□ 0.2
SBDSP1-202ENST00000423945 C20orf27Q9GZN8 174 aa16.3■□□□□ 0.2
SBDSP1-202ENST00000423945 REEP4Q9H6H4 257 aa16.3■□□□□ 0.2
SBDSP1-202ENST00000423945 TAS2R9Q9NYW1 312 aa16.3■□□□□ 0.2
SBDSP1-202ENST00000423945 TMED5Q9Y3A6 229 aa16.3■□□□□ 0.2
SBDSP1-202ENST00000423945 MYO9AB2RTY4 2548 aa16.3■□□□□ 0.2
SBDSP1-202ENST00000423945 PKDREJQ9NTG1 2253 aa16.3■□□□□ 0.2
SBDSP1-202ENST00000423945 FBN2P35556 2912 aa16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 WDR91A4D1P6 747 aa16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 OR6C70A6NIJ9 312 aa16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 B4DXG7 233 aa16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 PDPK1O15530 556 aa16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 SKAP2O75563 359 aaPredicted RBP16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 REM1O75628 298 aa16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 SLITRK5O94991 958 aa16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 HPNP05981 417 aa16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 FRKP42685 505 aaPredicted RBP16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 CDK9P50750 372 aaKnown RBP16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 RPP38P78345 283 aaKnown RBP16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 TIGD3Q6B0B8 471 aa16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 SLC30A6Q6NXT4 461 aa16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 ZNF585AQ6P3V2 769 aa16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 WDR53Q7Z5U6 358 aaPredicted RBP16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 PACS2Q86VP3 889 aa16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 NUDCD3Q8IVD9 361 aa16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 SLC44A2Q8IWA5 706 aaPredicted RBP16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 EID3Q8N140 333 aa16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 WDSUB1Q8N9V3 476 aa16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 NUDT8Q8WV74 236 aa16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 SDCCAG3Q96C92 435 aa16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 COL21A1Q96P44 957 aa16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 ADOQ96SZ5 270 aa16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 OSBPL11Q9BXB4 747 aa16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 METTL7AQ9H8H3 244 aa16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 RNF6Q9Y252 685 aa16.29■□□□□ 0.2
SBDSP1-202ENST00000423945 HCFC1P51610 2035 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 KIAA1549Q9HCM3 1950 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 PRAMEF25A6NGN4 478 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 SNPHO15079 494 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 PEX11AO75192 247 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 COQ9O75208 318 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 TUBBP07437 444 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 IFI6P09912 130 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 PRF1P14222 555 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 ACVR2AP27037 513 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 MASP1P48740 699 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 CRYZQ08257 329 aaKnown RBP16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 ZNF155Q12901 538 aaPredicted RBP16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 SNTA1Q13424 505 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 CHI3L2Q15782 390 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 C6orf136Q5SQH8 315 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 ANGPTL8Q6UXH0 198 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 SARAFQ96BY9 339 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 EFHD2Q96C19 240 aaPredicted RBP16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 PPCDCQ96CD2 204 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 PGM2Q96G03 612 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 CENPHQ9H3R5 247 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 EXO5Q9H790 373 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 B4GALT7Q9UBV7 327 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 ACAD8Q9UKU7 415 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 ACTL7BQ9Y614 415 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 DCHS2Q6V1P9 2916 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 PCNX3Q9H6A9 2034 aa16.28■□□□□ 0.2
SBDSP1-202ENST00000423945 C17orf51A8MQB3 221 aa16.27■□□□□ 0.2
SBDSP1-202ENST00000423945 TM9SF1O15321 606 aa16.27■□□□□ 0.2
SBDSP1-202ENST00000423945 BIRC5O15392 142 aa16.27■□□□□ 0.2
SBDSP1-202ENST00000423945 SERPINE1P05121 402 aa16.27■□□□□ 0.2
SBDSP1-202ENST00000423945 EFNA1P20827 205 aaPredicted RBP16.27■□□□□ 0.2
SBDSP1-202ENST00000423945 KIR3DL1P43629 444 aa16.27■□□□□ 0.2
SBDSP1-202ENST00000423945 GAS1P54826 345 aa16.27■□□□□ 0.2
SBDSP1-202ENST00000423945 PMPCAQ10713 525 aa16.27■□□□□ 0.2
SBDSP1-202ENST00000423945 HSPB3Q12988 150 aa16.27■□□□□ 0.2
SBDSP1-202ENST00000423945 EIPR1Q53HC9 387 aa16.27■□□□□ 0.2
SBDSP1-202ENST00000423945 TMEM211Q6ICI0 200 aa16.27■□□□□ 0.2
SBDSP1-202ENST00000423945 LRIG3Q6UXM1 1119 aa16.27■□□□□ 0.2
SBDSP1-202ENST00000423945 LARP4Q71RC2 724 aaKnown RBP eCLIP16.27■□□□□ 0.2
SBDSP1-202ENST00000423945 CCDC71Q8IV32 467 aaPredicted RBP16.27■□□□□ 0.2
SBDSP1-202ENST00000423945 HOMEZQ8IX15 550 aa16.27■□□□□ 0.2
SBDSP1-202ENST00000423945 ZNF781Q8N8C0 355 aa16.27■□□□□ 0.2
SBDSP1-202ENST00000423945 MARVELD3Q96A59 401 aa16.27■□□□□ 0.2
SBDSP1-202ENST00000423945 PPP3R2Q96LZ3 170 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms