RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 MIF4GDA9UHW6 222 aaKnown RBP3.32□□□□□ -1.88
TOP2A-201ENST00000423485 ENSAO43768 121 aaKnown RBP3.32□□□□□ -1.88
TOP2A-201ENST00000423485 PSMD10O75832 226 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 ABLIM3O94929 683 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 TBX18O95935 607 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 GM2AP17900 193 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 EPORP19235 508 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 TYK2P29597 1187 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 MAGEA3P43357 314 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 XCR1P46094 333 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 NUDT2P50583 147 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 NME5P56597 212 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 JAM2P57087 298 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 NAAAQ02083 359 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 SNX1Q13596 522 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 C5orf22Q49AR2 442 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 MBOAT1Q6ZNC8 495 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 NUDT13Q86X67 352 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 OR51G2Q8NGK0 314 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 LRRC58Q96CX6 371 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 GPATCH1Q9BRR8 931 aaKnown RBP3.32□□□□□ -1.88
TOP2A-201ENST00000423485 TTYH2Q9BSA4 534 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 SLC6A17Q9H1V8 727 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 LPAR2Q9HBW0 351 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 CD93Q9NPY3 652 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 ASF1BQ9NVP2 202 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 ANKRD10Q9NXR5 420 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 KCNIP1Q9NZI2 227 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 SLC7A11Q9UPY5 501 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 CXorf65A6NEN9 183 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 AGAP14A8MT82 685 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 CENPBD1B2RD01 187 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 H3BNX3 289 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 SULT2B1O00204 365 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 PRMT5O14744 637 aaPredicted RBP3.32□□□□□ -1.88
TOP2A-201ENST00000423485 PLRG1O43660 514 aaKnown RBP3.32□□□□□ -1.88
TOP2A-201ENST00000423485 KRT36O76013 467 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 FTCDO95954 541 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 IFNGP01579 166 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 RBP1P09455 135 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 CNR1P21554 472 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 FCARP24071 287 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 CTSSP25774 331 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 TSFMP43897 325 aaKnown RBP3.32□□□□□ -1.88
TOP2A-201ENST00000423485 GABRA2P47869 451 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 RAB13P51153 203 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 MANFP55145 182 aaKnown RBP3.32□□□□□ -1.88
TOP2A-201ENST00000423485 CASP8Q14790 479 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 HEPACAMQ14CZ8 416 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 PDK3Q15120 406 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 SEC23BQ15437 767 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 GPR19Q15760 415 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 DEFB110Q30KQ9 67 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 NSUN5P1Q3KNT7 163 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 DCAF10Q5QP82 559 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 LRRC8BQ6P9F7 803 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 CLNKQ7Z7G1 428 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 GPSM1Q86YR5 675 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 PLPP6Q8IY26 295 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 RTL3Q8N8U3 475 aaKnown RBP3.32□□□□□ -1.88
TOP2A-201ENST00000423485 ANGPTL6Q8NI99 470 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 FAM110DQ8TAY7 271 aaPredicted RBP3.32□□□□□ -1.88
TOP2A-201ENST00000423485 SMAP2Q8WU79 429 aaPredicted RBP3.32□□□□□ -1.88
TOP2A-201ENST00000423485 FAM118BQ9BPY3 351 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 AARSD1Q9BTE6 412 aaKnown RBP3.32□□□□□ -1.88
TOP2A-201ENST00000423485 DCUN1D5Q9BTE7 237 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 ROPN1BQ9BZX4 212 aaPredicted RBP3.32□□□□□ -1.88
TOP2A-201ENST00000423485 TFB2MQ9H5Q4 396 aaKnown RBP3.32□□□□□ -1.88
TOP2A-201ENST00000423485 CAB39LQ9H9S4 337 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 ROPN1Q9HAT0 212 aaPredicted RBP3.32□□□□□ -1.88
TOP2A-201ENST00000423485 NMRAL1Q9HBL8 299 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 RSL24D1Q9UHA3 163 aaKnown RBP3.32□□□□□ -1.88
TOP2A-201ENST00000423485 TAC3Q9UHF0 121 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 TMEFF2Q9UIK5 374 aaPredicted RBP3.32□□□□□ -1.88
TOP2A-201ENST00000423485 AP4B1Q9Y6B7 739 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 LOC102725191A0A1B0GVB3 256 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 E9PLN8 166 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 LCA5LO95447 670 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 ATP6V1B1P15313 513 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF12P17014 697 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 RHCEP18577 417 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 CSNK2A2P19784 350 aaPredicted RBP3.32□□□□□ -1.88
TOP2A-201ENST00000423485 SLC6A6P31641 620 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 ECI1P42126 302 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 BDKRB1P46663 353 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 CRISP1P54107 249 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 CDK3Q00526 305 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 SCN1BQ07699 218 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 KLC1Q07866 573 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 SCRN3Q0VDG4 424 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 MPP2Q14168 576 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 SLC18A3Q16572 532 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 LRRC10Q5BKY1 277 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF362Q5T0B9 420 aaPredicted RBP3.32□□□□□ -1.88
TOP2A-201ENST00000423485 PRAMEF17Q5VTA0 474 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 AADACL2Q6P093 401 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 SHISA2Q6UWI4 295 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF836Q6ZNA1 936 aa3.32□□□□□ -1.88
TOP2A-201ENST00000423485 MRPL21Q7Z2W9 205 aaKnown RBP3.32□□□□□ -1.88
TOP2A-201ENST00000423485 CPEB2Q7Z5Q1 589 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms