RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 HTR1EP28566 365 aa13.56□□□□□ -0.24
LINC01840-201ENST00000421870 GRNP28799 593 aaKnown RBP13.56□□□□□ -0.24
LINC01840-201ENST00000421870 NTSP30990 170 aa13.56□□□□□ -0.24
LINC01840-201ENST00000421870 MC3RP41968 323 aa13.56□□□□□ -0.24
LINC01840-201ENST00000421870 ASMTP46597 345 aa13.56□□□□□ -0.24
LINC01840-201ENST00000421870 PNLIPRP2P54317 469 aa13.56□□□□□ -0.24
LINC01840-201ENST00000421870 CORO7P57737 925 aa13.56□□□□□ -0.24
LINC01840-201ENST00000421870 RPL38P63173 70 aaKnown RBP13.56□□□□□ -0.24
LINC01840-201ENST00000421870 MPP2Q14168 576 aa13.56□□□□□ -0.24
LINC01840-201ENST00000421870 GALNTL6Q49A17 601 aa13.56□□□□□ -0.24
LINC01840-201ENST00000421870 TMEM107Q6UX40 140 aa13.56□□□□□ -0.24
LINC01840-201ENST00000421870 LRIG3Q6UXM1 1119 aa13.56□□□□□ -0.24
LINC01840-201ENST00000421870 TMBIM1Q969X1 311 aa13.56□□□□□ -0.24
LINC01840-201ENST00000421870 TMCO6Q96DC7 493 aa13.56□□□□□ -0.24
LINC01840-201ENST00000421870 MTERF3Q96E29 417 aa13.56□□□□□ -0.24
LINC01840-201ENST00000421870 PPP3R2Q96LZ3 170 aa13.56□□□□□ -0.24
LINC01840-201ENST00000421870 C3orf30Q96M34 536 aa13.56□□□□□ -0.24
LINC01840-201ENST00000421870 TSSK3Q96PN8 268 aa13.56□□□□□ -0.24
LINC01840-201ENST00000421870 NTMQ9P121 344 aa13.56□□□□□ -0.24
LINC01840-201ENST00000421870 C15orf41Q9Y2V0 281 aa13.56□□□□□ -0.24
LINC01840-201ENST00000421870 CACNA1CQ13936 2221 aa13.56□□□□□ -0.24
LINC01840-201ENST00000421870 HCFC1P51610 2035 aa13.56□□□□□ -0.24
LINC01840-201ENST00000421870 ITM2AO43736 263 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 WDR1O75083 606 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 PEX11AO75192 247 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 HOXD4P09016 255 aaPredicted RBP13.55□□□□□ -0.24
LINC01840-201ENST00000421870 ACVR2AP27037 513 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 GDF1P27539 372 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 PTPN6P29350 595 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 CDK9P50750 372 aaKnown RBP13.55□□□□□ -0.24
LINC01840-201ENST00000421870 CYP27C1Q4G0S4 372 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 ZNF385BQ569K4 471 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 C6orf136Q5SQH8 315 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 WLSQ5T9L3 541 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 RTL6Q6ICC9 239 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 ANKRD26P1Q6NSI1 321 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 ZNF585AQ6P3V2 769 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 ACAD11Q709F0 780 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 ZNF551Q7Z340 670 aaPredicted RBP13.55□□□□□ -0.24
LINC01840-201ENST00000421870 SLC44A2Q8IWA5 706 aaPredicted RBP13.55□□□□□ -0.24
LINC01840-201ENST00000421870 RPRMLQ8N4K4 120 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 WDSUB1Q8N9V3 476 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 OR4N2Q8NGD1 307 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 OR5M9Q8NGP3 310 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 OR1J4Q8NGS1 313 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 AGR3Q8TD06 166 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 HOXB13Q92826 284 aaPredicted RBP13.55□□□□□ -0.24
LINC01840-201ENST00000421870 GFM2Q969S9 779 aaKnown RBP13.55□□□□□ -0.24
LINC01840-201ENST00000421870 ADOQ96SZ5 270 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 METTL7AQ9H8H3 244 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 ACSS1Q9NUB1 689 aaPredicted RBP13.55□□□□□ -0.24
LINC01840-201ENST00000421870 COQ3Q9NZJ6 369 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 TNFRSF10DQ9UBN6 386 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 ACAD8Q9UKU7 415 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.55□□□□□ -0.24
LINC01840-201ENST00000421870 NAV2Q8IVL1 2488 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 UNC79Q9P2D8 2635 aa13.55□□□□□ -0.24
LINC01840-201ENST00000421870 PCNX3Q9H6A9 2034 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 WDR91A4D1P6 747 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 C2orf72A6NCS6 295 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 FIGNL2A6NMB9 653 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 TMEM114B3SHH9 223 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 SNPHO15079 494 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 PDPK1O15530 556 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 HNRNPRO43390 633 aaKnown RBP13.54□□□□□ -0.24
LINC01840-201ENST00000421870 AKAP10O43572 662 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 CBR3O75828 277 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 SNUPNO95149 360 aaKnown RBP13.54□□□□□ -0.24
LINC01840-201ENST00000421870 ZWINTO95229 277 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 SERPINE1P05121 402 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 GABRA1P14867 456 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 MAP3K8P41279 467 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 MASP1P48740 699 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 PMPCAQ10713 525 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 GAB1Q13480 694 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 EFR3AQ14156 821 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 MLC1Q15049 377 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 CHI3L2Q15782 390 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 NHSL2Q5HYW2 709 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 R3HCC1LQ7Z5L2 792 aaKnown RBP13.54□□□□□ -0.24
LINC01840-201ENST00000421870 LILRB4Q8NHJ6 448 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 RND1Q92730 232 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 CIDECQ96AQ7 238 aaPredicted RBP13.54□□□□□ -0.24
LINC01840-201ENST00000421870 SDCCAG3Q96C92 435 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 PPCDCQ96CD2 204 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 ZBED6CLQ96FA7 236 aaPredicted RBP13.54□□□□□ -0.24
LINC01840-201ENST00000421870 PKNOX2Q96KN3 472 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 TTYH2Q9BSA4 534 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 LMF2Q9BU23 707 aaKnown RBP13.54□□□□□ -0.24
LINC01840-201ENST00000421870 C20orf27Q9GZN8 174 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 SLC6A15Q9H2J7 730 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 CENPHQ9H3R5 247 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 EXO5Q9H790 373 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 ZNF395Q9H8N7 513 aaPredicted RBP13.54□□□□□ -0.24
LINC01840-201ENST00000421870 GALNT9Q9HCQ5 603 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 DDX18Q9NVP1 670 aaKnown RBP13.54□□□□□ -0.24
LINC01840-201ENST00000421870 SH3BP4Q9P0V3 963 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 ATP6V1HQ9UI12 483 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 FAM215AQ9Y5M1 114 aa13.54□□□□□ -0.24
LINC01840-201ENST00000421870 NUP214P35658 2090 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms