RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 KIR3DL1P43629 444 aa15.05■□□□□ -0
LINC00404-201ENST00000418660 EFR3AQ14156 821 aa15.05■□□□□ -0
LINC00404-201ENST00000418660 UGT3A2Q3SY77 523 aa15.05■□□□□ -0
LINC00404-201ENST00000418660 RFTN2Q52LD8 501 aaPredicted RBP15.05■□□□□ -0
LINC00404-201ENST00000418660 TMEM107Q6UX40 140 aa15.05■□□□□ -0
LINC00404-201ENST00000418660 NPSR1Q6W5P4 371 aa15.05■□□□□ -0
LINC00404-201ENST00000418660 ZCCHC23Q6ZST2 131 aa15.05■□□□□ -0
LINC00404-201ENST00000418660 DDIASQ8IXT1 998 aa15.05■□□□□ -0
LINC00404-201ENST00000418660 TWIST2Q8WVJ9 160 aa15.05■□□□□ -0
LINC00404-201ENST00000418660 ZNF764Q96H86 408 aaPredicted RBP15.05■□□□□ -0
LINC00404-201ENST00000418660 ADOQ96SZ5 270 aa15.05■□□□□ -0
LINC00404-201ENST00000418660 ALKBH4Q9NXW9 302 aa15.05■□□□□ -0
LINC00404-201ENST00000418660 KLRF1Q9NZS2 232 aa15.05■□□□□ -0
LINC00404-201ENST00000418660 RAB21Q9UL25 225 aa15.05■□□□□ -0
LINC00404-201ENST00000418660 TMED5Q9Y3A6 229 aa15.05■□□□□ -0
LINC00404-201ENST00000418660 C15orf38-AP3S2A0A0A6YYH1 394 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 C2orf72A6NCS6 295 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 ESPNB1AK53 854 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 TMEM233B4DJY2 109 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 SNPHO15079 494 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 TBX19O60806 448 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 BPGMP07738 259 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 SNRPB2P08579 225 aaKnown RBP15.04■□□□□ -0
LINC00404-201ENST00000418660 IFI6P09912 130 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 SDC1P18827 310 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 PNLIPRP2P54317 469 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 RPL38P63173 70 aaKnown RBP15.04■□□□□ -0
LINC00404-201ENST00000418660 ZNF844Q08AG5 666 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 TOMM20Q15388 145 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 KRT71Q3SY84 523 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 SH2D4BQ5SQS7 431 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 CCDC71Q8IV32 467 aaPredicted RBP15.04■□□□□ -0
LINC00404-201ENST00000418660 SLC44A2Q8IWA5 706 aaPredicted RBP15.04■□□□□ -0
LINC00404-201ENST00000418660 OR2L13Q8N349 312 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 OR10Q1Q8NGQ4 319 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 GFM2Q969S9 779 aaKnown RBP15.04■□□□□ -0
LINC00404-201ENST00000418660 ELP4Q96EB1 424 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 TIMP4Q99727 224 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 SPOCK3Q9BQ16 436 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 ENKD1Q9H0I2 346 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 REEP4Q9H6H4 257 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 GALNT9Q9HCQ5 603 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 EXPH5Q8NEV8 1989 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 NCKAP5O14513 1909 aa15.04■□□□□ -0
LINC00404-201ENST00000418660 PCNX1Q96RV3 2341 aa15.03■□□□□ -0
LINC00404-201ENST00000418660 FAM47E-STBD1D6RA91 191 aa15.03■□□□□ -0
LINC00404-201ENST00000418660 UPK1AO00322 258 aa15.03■□□□□ -0
LINC00404-201ENST00000418660 PIP5K1BO14986 540 aa15.03■□□□□ -0
LINC00404-201ENST00000418660 RGS16O15492 202 aaPredicted RBP15.03■□□□□ -0
LINC00404-201ENST00000418660 CTIFO43310 598 aaKnown RBP15.03■□□□□ -0
LINC00404-201ENST00000418660 CBR3O75828 277 aa15.03■□□□□ -0
LINC00404-201ENST00000418660 PSMG1O95456 288 aa15.03■□□□□ -0
LINC00404-201ENST00000418660 TUBBP07437 444 aa15.03■□□□□ -0
LINC00404-201ENST00000418660 IL12BP29460 328 aa15.03■□□□□ -0
LINC00404-201ENST00000418660 ETV4P43268 484 aa15.03■□□□□ -0
LINC00404-201ENST00000418660 MRPS22P82650 360 aaKnown RBP15.03■□□□□ -0
LINC00404-201ENST00000418660 PSG6Q00889 435 aa15.03■□□□□ -0
LINC00404-201ENST00000418660 CRYZQ08257 329 aaKnown RBP15.03■□□□□ -0
LINC00404-201ENST00000418660 ZNF155Q12901 538 aaPredicted RBP15.03■□□□□ -0
LINC00404-201ENST00000418660 GALNTL6Q49A17 601 aa15.03■□□□□ -0
LINC00404-201ENST00000418660 CYP27C1Q4G0S4 372 aa15.03■□□□□ -0
LINC00404-201ENST00000418660 NHSL2Q5HYW2 709 aa15.03■□□□□ -0
LINC00404-201ENST00000418660 VASNQ6EMK4 673 aa15.03■□□□□ -0
LINC00404-201ENST00000418660 LARP4Q71RC2 724 aaKnown RBP eCLIP15.03■□□□□ -0
LINC00404-201ENST00000418660 ULK2Q8IYT8 1036 aa15.03■□□□□ -0
LINC00404-201ENST00000418660 ACBD4Q8NC06 268 aa15.03■□□□□ -0
LINC00404-201ENST00000418660 OR4N2Q8NGD1 307 aa15.03■□□□□ -0
LINC00404-201ENST00000418660 OR6Y1Q8NGX8 325 aa15.03■□□□□ -0
LINC00404-201ENST00000418660 TSSK3Q96PN8 268 aa15.03■□□□□ -0
LINC00404-201ENST00000418660 KCNJ16Q9NPI9 418 aa15.03■□□□□ -0
LINC00404-201ENST00000418660 DDX18Q9NVP1 670 aaKnown RBP15.03■□□□□ -0
LINC00404-201ENST00000418660 MAPRE3Q9UPY8 281 aa15.03■□□□□ -0
LINC00404-201ENST00000418660 OR10H1Q9Y4A9 318 aa15.03■□□□□ -0
LINC00404-201ENST00000418660 CENPEQ02224 2701 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 NINQ8N4C6 2090 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 NOTCH2Q04721 2471 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 A0A0G2JNJ9 132 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 FAM90A27PA6NNH2 459 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 AHRRA9YTQ3 701 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 PDPK1O15530 556 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 AKAP10O43572 662 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 TOXO94900 526 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 ARRB2P32121 409 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 ASMTP46597 345 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 ZFP36L2P47974 494 aaKnown RBP15.02■□□□□ -0
LINC00404-201ENST00000418660 PDE7AQ13946 482 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 EIPR1Q53HC9 387 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 WIPI1Q5MNZ9 446 aaPredicted RBP15.02■□□□□ -0
LINC00404-201ENST00000418660 RIPPLY2Q5TAB7 128 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 ANKRD26P1Q6NSI1 321 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 ZNF551Q7Z340 670 aaPredicted RBP15.02■□□□□ -0
LINC00404-201ENST00000418660 GDF7Q7Z4P5 450 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 PLCZ1Q86YW0 608 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 PM20D2Q8IYS1 436 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 WDSUB1Q8N9V3 476 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 AGR3Q8TD06 166 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 RNF138Q8WVD3 245 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 PPCDCQ96CD2 204 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 MTERF3Q96E29 417 aa15.02■□□□□ -0
LINC00404-201ENST00000418660 PPP3R2Q96LZ3 170 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms