RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 DICER1Q9UPY3 1922 aaKnown RBP2.41□□□□□ -2.02
VPS41-206ENST00000418457 ZSWIM8A7E2V4 1837 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 LOC100653049A0A140TA62 436 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 EDDM13A0A1B0GTR0 161 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 TCRBV3S1A0A5B6 114 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 FEZF1A0PJY2 475 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 FAM170AA1A519 330 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 HEATR9A2RTY3 570 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 FUOMA2VDF0 154 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 HTR3EA5X5Y0 456 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 PRR23AA6NEV1 266 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 H0YAE9 185 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 BLOC1S5-TXNDC5H3BN57 136 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 H3BSA7 217 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 DDX39AO00148 427 aaKnown RBP2.41□□□□□ -2.02
VPS41-206ENST00000418457 PLOD2O00469 737 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 FBP2O00757 339 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 UBE2CO00762 179 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 CYB561D2O14569 222 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 AIM2O14862 343 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 OGTO15294 1046 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 PSMD3O43242 534 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 GRID2O43424 1007 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 ZBTB14O43829 449 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 PLOD3O60568 738 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 SUPT3HO75486 399 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 LYPLA1O75608 230 aaPredicted RBP2.41□□□□□ -2.02
VPS41-206ENST00000418457 KRT34O76011 436 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 SRP72O76094 671 aaKnown RBP2.41□□□□□ -2.02
VPS41-206ENST00000418457 DDHD2O94830 711 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 VAPBO95292 243 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 WDPCPO95876 746 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 APRTP07741 180 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 ASNSP08243 561 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 DANCRP0C864 163 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 UMPSP11172 480 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 PDGFRAP16234 1089 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 XRCC1P18887 633 aaPredicted RBP2.41□□□□□ -2.02
VPS41-206ENST00000418457 CCNA2P20248 432 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 CDH3P22223 829 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 IL10P22301 178 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 SDC4P31431 198 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 PCGF2P35227 344 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 ARL2P36404 184 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 MTHFRP42898 656 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 ACOT2P49753 483 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 TMED10P49755 219 aaKnown RBP2.41□□□□□ -2.02
VPS41-206ENST00000418457 HNRNPFP52597 415 aaKnown RBP2.41□□□□□ -2.02
VPS41-206ENST00000418457 AIF1P55008 147 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 DNAJB13P59910 316 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 SNAP25P60880 206 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 STX1BP61266 288 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 PSME3P61289 254 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 ATP6V0D1P61421 351 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 NAA20P61599 178 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 PRKCEQ02156 737 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 PLOD1Q02809 727 aaPredicted RBP2.41□□□□□ -2.02
VPS41-206ENST00000418457 LGALS3BPQ08380 585 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 DMPKQ09013 629 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 BNIP2Q12982 314 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 BTG3Q14201 252 aaPredicted RBP2.41□□□□□ -2.02
VPS41-206ENST00000418457 MXD4Q14582 209 aaPredicted RBP2.41□□□□□ -2.02
VPS41-206ENST00000418457 ZNF846Q147U1 533 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 C16orf72Q14CZ0 275 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 EMC2Q15006 297 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 CYTH1Q15438 398 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 TAF13Q15543 124 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 BCL2A1Q16548 175 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 DPYSL2Q16555 572 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 UGCGQ16739 394 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 UGP2Q16851 508 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 KRTAP24-1Q3LI83 254 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 C2CD6Q53TS8 623 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 COQ5Q5HYK3 327 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 C6orf52Q5T4I8 152 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 CYP4A22Q5TCH4 519 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 ARHGEF16Q5VV41 709 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 CES4AQ5XG92 561 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 TXNRD3NBQ6F5E7 133 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 SPOPLQ6IQ16 392 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 FAM45BPQ6NSW5 357 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 CASC4Q6P4E1 433 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 TTC33Q6PID6 262 aaPredicted RBP2.41□□□□□ -2.02
VPS41-206ENST00000418457 ABRAXAS1Q6UWZ7 409 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 ZYG11AQ6WRX3 759 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 ZBTB49Q6ZSB9 765 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 ZCCHC23Q6ZST2 131 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 GET4Q7L5D6 327 aaPredicted RBP2.41□□□□□ -2.02
VPS41-206ENST00000418457 ISCA2Q86U28 154 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 SNX32Q86XE0 403 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 CLVS1Q8IUQ0 354 aaPredicted RBP2.41□□□□□ -2.02
VPS41-206ENST00000418457 C10orf107Q8IVU9 208 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 ZBTB8OSQ8IWT0 167 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 AQP12AQ8IXF9 295 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 SIX6OS1Q8N1H7 587 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 SNX31Q8N9S9 440 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 OR13J1Q8NGT2 312 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 JOSD2Q8TAC2 188 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 FAM45AQ8TCE6 357 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 RAB2BQ8WUD1 216 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms