RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 EIF1P41567 113 aaKnown RBP5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 RPS5P46782 204 aaKnown RBP5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 PCP4P48539 62 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 ARHGDIAP52565 204 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 PTTG1IPP53801 180 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 DCAF7P61962 342 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 YWHAGP61981 247 aaKnown RBP eCLIP5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 INCA1Q0VD86 236 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 ILF2Q12905 390 aaKnown RBP5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 BNIP2Q12982 314 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 PRKD1Q15139 912 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 KRT31Q15323 416 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 CHRFAM7AQ494W8 412 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 IQCCQ4KMZ1 466 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 PDSS1Q5T2R2 415 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 KRT79Q5XKE5 535 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 ITPRIPL1Q6GPH6 555 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 RPUSD3Q6P087 351 aaKnown RBP5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 ERICH5Q6P6B1 374 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 FAM199XQ6PEV8 388 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 FOXR2Q6PJQ5 311 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 SPOCD1Q6ZMY3 1216 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 TFAP2DQ7Z6R9 452 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 GPAT4Q86UL3 456 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 EID3Q8N140 333 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 ZBTB2Q8N680 514 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 CCDC185Q8N715 623 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 PACRGLQ8N7B6 248 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 ANKFN1Q8N957 763 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 NECAB1Q8N987 351 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 OR52H1Q8NGJ2 320 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 ZFAND1Q8TCF1 268 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 DTX3LQ8TDB6 740 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 PHF10Q8WUB8 498 aaKnown RBP5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 TFAP2CQ92754 450 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 SYN2Q92777 582 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 SCAMP4Q969E2 229 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 CPNE4Q96A23 557 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 PPWD1Q96BP3 646 aaKnown RBP5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 HES6Q96HZ4 224 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 BTN2A3PQ96KV6 586 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 KLHL32Q96NJ5 620 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 OR6C1Q96RD1 312 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 ERGIC2Q96RQ1 377 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 SLC38A3Q99624 504 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 SEC22CQ9BRL7 303 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 TBCDQ9BTW9 1192 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 CHID1Q9BWS9 393 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 ANKRD60Q9BZ19 345 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 IKZF4Q9H2S9 585 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 NELFAQ9H3P2 528 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 STN1Q9H668 368 aaKnown RBP5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 NHEJ1Q9H9Q4 299 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 SEC61A2Q9H9S3 476 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 EFCAB1Q9HAE3 211 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.14□□□□□ -1.595e-12■■■■■ 43.9
ECHDC1-206ENST00000417628 SMYD2Q9NRG4 433 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 MRPS18AQ9NVS2 196 aaKnown RBP5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 MED9Q9NWA0 146 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 RBAKQ9NYW8 714 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 COQ3Q9NZJ6 369 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 KCNJ14Q9UNX9 436 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 SNX24Q9Y343 169 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 A3GALT2U3KPV4 340 aa5.14□□□□□ -1.59
ECHDC1-206ENST00000417628 CACNA1CQ13936 2221 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 LRP4O75096 1905 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 CDHR4A6H8M9 788 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 TMEM210A6NLX4 147 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 ZNF729A6NN14 1252 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 LINC00587B1AMM8 73 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 TISP43B9A030 160 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 ANKRD63C9JTQ0 380 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 E9PLN8 166 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 H0YIV9 168 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 SOCS6O14544 535 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 AIM2O14862 343 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 TM9SF1O15321 606 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 RIPK2O43353 540 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 CIDEAO60543 219 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 CDC123O75794 336 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 SEMA3DO95025 777 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 PRSS23O95084 383 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 TNNC2P02585 160 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 FGF1P05230 155 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 CDK1P06493 297 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 FABP1P07148 127 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 ANXA2P07355 339 aaKnown RBP5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 ANKRD34CP0C6C1 535 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 FGF5P12034 268 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 ZNF30P17039 623 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 ZP3P21754 424 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 GABRB3P28472 473 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 HTR2BP41595 481 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 SLCO1A2P46721 670 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 KCNC1P48547 511 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 SERPINB10P48595 397 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 SLC11A2P49281 568 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 NUMBP49757 651 aa5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 SERPINH1P50454 418 aaKnown RBP5.13□□□□□ -1.59
ECHDC1-206ENST00000417628 UCP3P55916 312 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms