RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 SOX30O94993 753 aa21.25■□□□□ 0.99
SMARCB1-205ENST00000417137 PGRP06401 933 aa21.25■□□□□ 0.99
SMARCB1-205ENST00000417137 FBXW4P57775 412 aa21.25■□□□□ 0.99
SMARCB1-205ENST00000417137 HBA1P69905 142 aa21.25■□□□□ 0.99
SMARCB1-205ENST00000417137 FOXK1P85037 733 aa21.25■□□□□ 0.99
SMARCB1-205ENST00000417137 TBCELQ5QJ74 424 aa21.25■□□□□ 0.99
SMARCB1-205ENST00000417137 GK5Q6ZS86 529 aa21.25■□□□□ 0.99
SMARCB1-205ENST00000417137 FBXW8Q8N3Y1 598 aa21.25■□□□□ 0.99
SMARCB1-205ENST00000417137 OR4A15Q8NGL6 344 aa21.25■□□□□ 0.99
SMARCB1-205ENST00000417137 TMBIM1Q969X1 311 aa21.25■□□□□ 0.99
SMARCB1-205ENST00000417137 OR52E6Q96RD3 313 aa21.25■□□□□ 0.99
SMARCB1-205ENST00000417137 TRIM4Q9C037 500 aa21.25■□□□□ 0.99
SMARCB1-205ENST00000417137 CXorf36Q9H7Y0 433 aa21.25■□□□□ 0.99
SMARCB1-205ENST00000417137 TRIM33Q9UPN9 1127 aa21.25■□□□□ 0.99
SMARCB1-205ENST00000417137 CHCHD2Q9Y6H1 151 aaPredicted RBP21.25■□□□□ 0.99
SMARCB1-205ENST00000417137 A0A0G2JND7 137 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 ANKRD33BA6NCL7 494 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 SCN2BO60939 215 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 KRT16P08779 473 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 CCL3P10147 92 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 IL12AP29459 219 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 IL12BP29460 328 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 MRPL19P49406 292 aaKnown RBP21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 PSMD4P55036 377 aaKnown RBP21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 GPR85P60893 370 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 PHC1P78364 1004 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 ALDH6A1Q02252 535 aaKnown RBP21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 EFR3AQ14156 821 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 IGFBP7Q16270 282 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 DECR1Q16698 335 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 NPSR1Q6W5P4 371 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 CLECL1Q8IZS7 167 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 GALNT11Q8NCW6 608 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 OR2M7Q8NG81 312 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 RFWD2Q8NHY2 731 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 SPPL2AQ8TCT8 520 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 NR4A3Q92570 626 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 DIO2Q92813 273 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 TMCO6Q96DC7 493 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 FRMD6Q96NE9 622 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 COL21A1Q96P44 957 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 FGFR1OP2Q9NVK5 253 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 BTNL2Q9UIR0 455 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 CBLCQ9ULV8 474 aa21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 FAF1Q9UNN5 650 aaPredicted RBP21.24■□□□□ 0.99
SMARCB1-205ENST00000417137 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 OR6C70A6NIJ9 312 aa21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 CPSF4O95639 269 aaKnown RBP21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 ALOX5P09917 674 aa21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 GABRA3P34903 492 aa21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 SOAT1P35610 550 aa21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 POLR2JP52435 117 aaKnown RBP21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 DGKQP52824 942 aa21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 PNLIPRP2P54317 469 aa21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 PMP22Q01453 160 aa21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 GAB1Q13480 694 aa21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 TP53BP2Q13625 1128 aa21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 MFSD12Q6NUT3 480 aa21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 PAOXQ6QHF9 649 aa21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 ANKRD46Q86W74 232 aa21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 CPSF7Q8N684 471 aaKnown RBP21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 ZFP62Q8NB50 900 aaPredicted RBP21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 GPR151Q8TDV0 419 aa21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 SLC9A6Q92581 669 aa21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 HOXB13Q92826 284 aaPredicted RBP21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 GIMAP5Q96F15 307 aa21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 CCDC115Q96NT0 180 aa21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 RABEP2Q9H5N1 569 aa21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 DEPPQ9NTK1 212 aa21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 TMEM45AQ9NWC5 275 aa21.23■□□□□ 0.99
SMARCB1-205ENST00000417137 FAM234BA2RU67 622 aa21.22■□□□□ 0.99
SMARCB1-205ENST00000417137 NKX2-2O95096 273 aa21.22■□□□□ 0.99
SMARCB1-205ENST00000417137 KCNH1O95259 989 aa21.22■□□□□ 0.99
SMARCB1-205ENST00000417137 HMGN2P05204 90 aaKnown RBP21.22■□□□□ 0.99
SMARCB1-205ENST00000417137 EDN3P14138 238 aa21.22■□□□□ 0.99
SMARCB1-205ENST00000417137 ZNF24P17028 368 aa21.22■□□□□ 0.99
SMARCB1-205ENST00000417137 UQCRC2P22695 453 aa21.22■□□□□ 0.99
SMARCB1-205ENST00000417137 PIGAP37287 484 aa21.22■□□□□ 0.99
SMARCB1-205ENST00000417137 ATP4BP51164 291 aa21.22■□□□□ 0.99
SMARCB1-205ENST00000417137 KCNJ2P63252 427 aa21.22■□□□□ 0.99
SMARCB1-205ENST00000417137 PLGLB1Q02325 96 aa21.22■□□□□ 0.99
SMARCB1-205ENST00000417137 METTL21CQ5VZV1 264 aa21.22■□□□□ 0.99
SMARCB1-205ENST00000417137 ZNF324BQ6AW86 544 aaPredicted RBP21.22■□□□□ 0.99
SMARCB1-205ENST00000417137 TRIML2Q8N7C3 387 aa21.22■□□□□ 0.99
SMARCB1-205ENST00000417137 SLC35A4Q96G79 324 aa21.22■□□□□ 0.99
SMARCB1-205ENST00000417137 ADOQ96SZ5 270 aa21.22■□□□□ 0.99
SMARCB1-205ENST00000417137 ACTRT3Q9BYD9 372 aa21.22■□□□□ 0.99
SMARCB1-205ENST00000417137 RMND5AQ9H871 391 aa21.22■□□□□ 0.99
SMARCB1-205ENST00000417137 GIN1Q9NXP7 522 aa21.22■□□□□ 0.99
SMARCB1-205ENST00000417137 CNOT11Q9UKZ1 510 aaKnown RBP21.22■□□□□ 0.99
SMARCB1-205ENST00000417137 PCDHGB3Q9Y5G1 929 aa21.22■□□□□ 0.99
SMARCB1-205ENST00000417137 C9JVG2 144 aa21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 G3V3Y1 287 aa21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 ACOT7O00154 380 aa21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 TSPAN2O60636 221 aa21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 SNX4O95219 450 aa21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 NCF2P19878 526 aaPredicted RBP21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 MAP3K8P41279 467 aa21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 ELOAQ14241 798 aaKnown RBP21.21■□□□□ 0.99
SMARCB1-205ENST00000417137 LASP1Q14847 261 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms