RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 PRAMEF33A0A0G2JMD5 474 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 A0A1W2PNV4 684 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 A0A1W2PRD5 423 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 FEZF1A0PJY2 475 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 HYKKA2RU49 373 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 MYADML2A6NDP7 307 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 GOLGA6L9A6NEM1 432 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 SAGE2PA6NJ88 616 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 SHISA7A6NL88 538 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 CCT8L1PA6NM43 557 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 HHLA1C9JL84 531 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 MKRN2OSH3BPM6 223 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 KLRC4-KLRK1H3BQV0 150 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 M0R036 132 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 DLGAP1O14490 977 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 XRCC2O43543 280 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 SYT7O43581 403 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 LDB2O43679 373 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 SNX3O60493 162 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 PRAMEF10O60809 474 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 PFKFB2O60825 505 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 SMIM24O75264 130 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 PRKRAO75569 313 aaKnown RBP2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 GPX5O75715 221 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 ATP6AP2O75787 350 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 VAPBO95292 243 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 KNG1P01042 644 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 EPOP01588 193 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 APOEP02649 317 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 RAF1P04049 648 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 SNRPAP09012 282 aaKnown RBP2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 GSTT2P0CG29 244 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 GSTT2BP0CG30 244 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 GIMD1P0DJR0 217 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 PSKH1P11801 424 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 IRF2P14316 349 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 ATP1B2P14415 290 aaPredicted RBP2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 NCK1P16333 377 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 ZNF26P17031 533 aaPredicted RBP2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 PGAM1P18669 254 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 DTYMKP23919 212 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 CHATP28329 748 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 TEAD1P28347 426 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 PPP2R1BP30154 601 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 GTF2H1P32780 548 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 KDELR2P33947 212 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 PTGER4P35408 488 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 MAS1LP35410 378 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 CD79BP40259 229 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 MAGEA6P43360 314 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 OR3A3P47888 321 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 ALDH3B2P48448 385 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 PPP3CCP48454 512 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 RGS6P49758 472 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 ART1P52961 327 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 NUP107P57740 925 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 OR2B6P58173 313 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 ACTBP60709 375 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 RAB10P61026 200 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 WDR5P61964 334 aaKnown RBP2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 ACTA2P62736 377 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 RPS6P62753 249 aaKnown RBP2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 ERVK-25P63136 954 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 ACTG1P63261 375 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 ACTG2P63267 376 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 ACTC1P68032 377 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 ACTA1P68133 377 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 LCN2P80188 198 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 PLA2G7Q13093 441 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 MYBPHQ13203 477 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 GRB7Q14451 532 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 FAM189A2Q15884 450 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 IMPG1Q17R60 797 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 LINC01620Q4KN68 170 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 ESCO2Q56NI9 601 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 ARL13AQ5H913 290 aaPredicted RBP2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 PRAMEF19Q5SWL8 479 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 OR2G6Q5TZ20 316 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 FAM69BQ5VUD6 431 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 FAM109BQ6ICB4 259 aaPredicted RBP2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 SPOPLQ6IQ16 392 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 RGMBQ6NW40 437 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 PLXDC2Q6UX71 529 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 G2E3Q7L622 706 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 TMPRSS9Q7Z410 1059 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 PARGQ86W56 976 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 ZFAND4Q86XD8 727 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 MARCH9Q86YJ5 346 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 ZNF100Q8IYN0 542 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 ZBED8Q8IZ13 594 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 PELI3Q8N2H9 469 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 TRAM1L1Q8N609 369 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 CLDN19Q8N6F1 224 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 TMEM99Q8N816 258 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 C8orf31Q8N9H6 132 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 KYQ8NBH2 561 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 OR4N2Q8NGD1 307 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 OR5D18Q8NGL1 313 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 OR4C15Q8NGM1 316 aa2.89□□□□□ -1.95
CTDSPL-203ENST00000416688 OR4D5Q8NGN0 318 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms