RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 LIPT1Q9Y234 373 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 DSPPQ9NZW4 1301 aa13.88□□□□□ -0.19
NCKIPSD-204ENST00000416649 FAM74A7A6NL05 159 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 OR5K4A6NMS3 321 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 SAP18O00422 153 aaKnown RBP13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 IDSP22304 550 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 AOAHP28039 575 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 DOC2AQ14183 400 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 FGL2Q14314 439 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 FAM74A3Q4VXF1 159 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 CERS6Q6ZMG9 384 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 HMGN2P46Q86SG4 172 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 FBXO22Q8NEZ5 403 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 OR4F15Q8NGB8 312 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 ATOH1Q92858 354 aaPredicted RBP13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 KLHL1Q9NR64 748 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 FLVCR2Q9UPI3 526 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 ZFP37Q9Y6Q3 630 aaPredicted RBP13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 TRDV1A0A1B0GX56 115 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 C5orf58C9J3I9 102 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 PRMT3O60678 531 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 CH25HO95992 272 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 URODP06132 367 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 HOXB3P14651 431 aaPredicted RBP13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 ELAVL4P26378 380 aaKnown RBP13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 FGF9P31371 208 aaPredicted RBP13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 ACSL1P33121 698 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 BMP8BP34820 402 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 ZP1P60852 638 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 DEFB103AP81534 67 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 GSG1Q2KHT4 349 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 NHLRC3Q5JS37 347 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 SFRP4Q6FHJ7 346 aaPredicted RBP13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 TNFAIP8L2Q6P589 184 aaPredicted RBP13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 TRIM40Q6P9F5 258 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 FAM198BQ6UWH4 519 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 DGLUCYQ7Z3D6 616 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 BMP8AQ7Z5Y6 402 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 TECPR1Q7Z6L1 1165 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 CLRN3Q8NCR9 226 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 DPYSL5Q9BPU6 564 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 DNAJC11Q9NVH1 559 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 ANGPT4Q9Y264 503 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 ASB4Q9Y574 426 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 STON1Q9Y6Q2 735 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 GJB5O95377 273 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 H1F0P07305 194 aaKnown RBP13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 NMBP08949 121 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 ITGB8P26012 769 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 MMP12P39900 470 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 OPRD1P41143 372 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 NFATC2Q13469 925 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 PIN1Q13526 163 aaPredicted RBP13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 OCLNQ16625 522 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 CLEC12AQ5QGZ9 265 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 KIAA1161Q6NSJ0 714 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 RRM2BQ7LG56 351 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 NR2C2APQ86WQ0 139 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 RPLP0P6Q8NHW5 317 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 MED8Q96G25 268 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 NARS2Q96I59 477 aaKnown RBP13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 SECISBP2Q96T21 854 aaKnown RBP13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 MVB12BQ9H7P6 319 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 GLS2Q9UI32 602 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 BTNL2Q9UIR0 455 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 CKAP5Q14008 2032 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 DOCK6Q96HP0 2047 aa13.87□□□□□ -0.19
NCKIPSD-204ENST00000416649 MID1O15344 667 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 TFP02787 698 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 BCHEP06276 602 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 LIMS3P0CW19 117 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 LIMS4P0CW20 117 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 SULT1A3P0DMM9 295 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 SULT1A4P0DMN0 295 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 CSF2RAP15509 400 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 MTNR1AP48039 350 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 SGSHP51688 502 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 MPEG1Q2M385 716 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 RGS7BPQ6MZT1 257 aaPredicted RBP13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 PGBD2Q6P3X8 592 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 SLC39A5Q6ZMH5 540 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 KLBQ86Z14 1044 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 OR52N2Q8NGI0 321 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 ZSCAN32Q9NX65 697 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 TESQ9UGI8 421 aaKnown RBP13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 MLXQ9UH92 298 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 RASD1Q9Y272 281 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 DRGXA6NNA5 263 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 LDOC1O95751 146 aaPredicted RBP13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 CD22P20273 847 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 PTBP1P26599 531 aaKnown RBP eCLIP13.86□□□□□ -0.194e-6■■■■■ 29.2
NCKIPSD-204ENST00000416649 DGKGP49619 791 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 DSG2Q14126 1118 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 FAM27D1Q5T7N8 215 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 LRRC70Q7Z2Q7 622 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 RASGRP3Q8IV61 690 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 OR5M3Q8NGP4 307 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 WDR48Q8TAF3 677 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 FANK1Q8TC84 345 aa13.86□□□□□ -0.19
NCKIPSD-204ENST00000416649 SLC7A13Q8TCU3 470 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms