RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 PRR5P85299 388 aa16.54■□□□□ 0.24
SEMA3B-201ENST00000416295 PSG6Q00889 435 aa16.54■□□□□ 0.24
SEMA3B-201ENST00000416295 FOXO1Q12778 655 aa16.54■□□□□ 0.24
SEMA3B-201ENST00000416295 DPY19L1Q2PZI1 675 aa16.54■□□□□ 0.24
SEMA3B-201ENST00000416295 CYP27C1Q4G0S4 372 aa16.54■□□□□ 0.24
SEMA3B-201ENST00000416295 TMEM81Q6P7N7 255 aa16.54■□□□□ 0.24
SEMA3B-201ENST00000416295 SZRD1Q7Z422 152 aa16.54■□□□□ 0.24
SEMA3B-201ENST00000416295 TMBIM1Q969X1 311 aa16.54■□□□□ 0.24
SEMA3B-201ENST00000416295 COL21A1Q96P44 957 aa16.54■□□□□ 0.24
SEMA3B-201ENST00000416295 LMF2Q9BU23 707 aaKnown RBP16.54■□□□□ 0.24
SEMA3B-201ENST00000416295 Q9N2J8 555 aa16.54■□□□□ 0.24
SEMA3B-201ENST00000416295 TUBA8Q9NY65 449 aaPredicted RBP16.54■□□□□ 0.24
SEMA3B-201ENST00000416295 OSGIN2Q9Y236 505 aa16.54■□□□□ 0.24
SEMA3B-201ENST00000416295 GOLGA8QA0A0J9YX86 632 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 GOLGA8OA6NCC3 632 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 GOLGA8NF8WBI6 632 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 EMC8O43402 210 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 REM1O75628 298 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 EFNA1P20827 205 aaPredicted RBP16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 IL12BP29460 328 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 EFR3AQ14156 821 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 HYAL4Q2M3T9 481 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 PGS1Q32NB8 556 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 VPS26BQ4G0F5 336 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 NXNQ6DKJ4 435 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 NUP43Q8NFH3 380 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 OR8J2Q8NGG1 315 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 PSMA8Q8TAA3 256 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 ACTRT2Q8TDY3 377 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 TESCQ96BS2 214 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 TMCO6Q96DC7 493 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 SLC35A4Q96G79 324 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 MAELQ96JY0 434 aaKnown RBP16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 ZNF597Q96LX8 424 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 RILPQ96NA2 401 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 PSMG3-AS1Q96PY0 264 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 ANGPTL4Q9BY76 406 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 METTL7AQ9H8H3 244 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 ZFP64Q9NPA5 681 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 EQTNQ9NQ60 294 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 AIG1Q9NVV5 245 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 MRTO4Q9UKD2 239 aaKnown RBP16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 USH1CQ9Y6N9 552 aa16.53■□□□□ 0.24
SEMA3B-201ENST00000416295 FAM166BA8MTA8 275 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 ANKRD28O15084 1053 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 CFLARO15519 480 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 DIAPH2O60879 1101 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 UGT2B11O75310 529 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 STSP08842 583 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 ALDOCP09972 364 aaKnown RBP16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 CASP3P42574 277 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 KIR3DL1P43629 444 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 PRKAG1P54619 331 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 SNTA1Q13424 505 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 DECR1Q16698 335 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 HSP90B2PQ58FF3 399 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 CMPK2Q5EBM0 449 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 TMEM198Q66K66 360 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 ZCCHC12Q6PEW1 402 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 PAOXQ6QHF9 649 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 MAVSQ7Z434 540 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 PACS2Q86VP3 889 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 FAM109AQ8N4B1 249 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 CDRT4Q8N9R6 151 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 CKAP2Q8WWK9 683 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 HGDQ93099 445 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 FAM120BQ96EK7 910 aaKnown RBP16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 MAGEB18Q96M61 343 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 ADOQ96SZ5 270 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 ZDHHC11Q9H8X9 412 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 PROK2Q9HC23 129 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 SLCO1B3Q9NPD5 702 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 SIRT3Q9NTG7 399 aaPredicted RBP16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 B4GALT7Q9UBV7 327 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 SLC5A6Q9Y289 635 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 SNX8Q9Y5X2 465 aa16.52■□□□□ 0.24
SEMA3B-201ENST00000416295 A0A1B0GUH1 482 aa16.51■□□□□ 0.23
SEMA3B-201ENST00000416295 E9PBE3 544 aa16.51■□□□□ 0.23
SEMA3B-201ENST00000416295 RNASET2O00584 256 aaKnown RBP16.51■□□□□ 0.23
SEMA3B-201ENST00000416295 ZNF195O14628 629 aa16.51■□□□□ 0.23
SEMA3B-201ENST00000416295 CDC40O60508 579 aaKnown RBP eCLIP16.51■□□□□ 0.23
SEMA3B-201ENST00000416295 TSPAN2O60636 221 aa16.51■□□□□ 0.23
SEMA3B-201ENST00000416295 SLC19A2O60779 497 aa16.51■□□□□ 0.23
SEMA3B-201ENST00000416295 TRIM3O75382 744 aaPredicted RBP16.51■□□□□ 0.23
SEMA3B-201ENST00000416295 WISP2O76076 250 aa16.51■□□□□ 0.23
SEMA3B-201ENST00000416295 TGDSO95455 350 aa16.51■□□□□ 0.23
SEMA3B-201ENST00000416295 C6orf47O95873 294 aa16.51■□□□□ 0.23
SEMA3B-201ENST00000416295 IDO1P14902 403 aa16.51■□□□□ 0.23
SEMA3B-201ENST00000416295 MASP1P48740 699 aa16.51■□□□□ 0.23
SEMA3B-201ENST00000416295 PRIM2P49643 509 aa16.51■□□□□ 0.23
SEMA3B-201ENST00000416295 PNLIPRP2P54317 469 aa16.51■□□□□ 0.23
SEMA3B-201ENST00000416295 PSMD4P55036 377 aaKnown RBP16.51■□□□□ 0.23
SEMA3B-201ENST00000416295 CASP6P55212 293 aa16.51■□□□□ 0.23
SEMA3B-201ENST00000416295 SPDYE7PQ495Y7 208 aa16.51■□□□□ 0.23
SEMA3B-201ENST00000416295 SLC9B1Q4ZJI4 515 aa16.51■□□□□ 0.23
SEMA3B-201ENST00000416295 C4orf17Q53FE4 359 aa16.51■□□□□ 0.23
SEMA3B-201ENST00000416295 ANXA8L1Q5VT79 327 aa16.51■□□□□ 0.23
SEMA3B-201ENST00000416295 SLC30A6Q6NXT4 461 aa16.51■□□□□ 0.23
SEMA3B-201ENST00000416295 TMEM251Q8N6I4 163 aa16.51■□□□□ 0.23
SEMA3B-201ENST00000416295 VPS37AQ8NEZ2 397 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms