RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 VSTM2LQ96N03 204 aa22.8■■□□□ 1.24
HLA-C-204ENST00000415537 ADOQ96SZ5 270 aa22.8■■□□□ 1.24
HLA-C-204ENST00000415537 PRDM14Q9GZV8 571 aa22.8■■□□□ 1.24
HLA-C-204ENST00000415537 MYNNQ9NPC7 610 aa22.8■■□□□ 1.24
HLA-C-204ENST00000415537 EXO1Q9UQ84 846 aaKnown RBP22.8■■□□□ 1.24
HLA-C-204ENST00000415537 MYO1GB0I1T2 1018 aa22.79■■□□□ 1.24
HLA-C-204ENST00000415537 COQ9O75208 318 aa22.79■■□□□ 1.24
HLA-C-204ENST00000415537 SEC22BO75396 215 aa22.79■■□□□ 1.24
HLA-C-204ENST00000415537 NME6O75414 186 aaPredicted RBP22.79■■□□□ 1.24
HLA-C-204ENST00000415537 CBR3O75828 277 aa22.79■■□□□ 1.24
HLA-C-204ENST00000415537 JUNP05412 331 aaKnown RBP22.79■■□□□ 1.24
HLA-C-204ENST00000415537 BMP7P18075 431 aa22.79■■□□□ 1.24
HLA-C-204ENST00000415537 NTSP30990 170 aa22.79■■□□□ 1.24
HLA-C-204ENST00000415537 EFR3AQ14156 821 aa22.79■■□□□ 1.24
HLA-C-204ENST00000415537 ACSF3Q4G176 576 aaPredicted RBP22.79■■□□□ 1.24
HLA-C-204ENST00000415537 CLEC6AQ6EIG7 209 aa22.79■■□□□ 1.24
HLA-C-204ENST00000415537 NOXRED1Q6NXP6 359 aa22.79■■□□□ 1.24
HLA-C-204ENST00000415537 LARP4Q71RC2 724 aaKnown RBP eCLIP22.79■■□□□ 1.242e-6■■■□□ 15.2
HLA-C-204ENST00000415537 YRDCQ86U90 279 aaKnown RBP22.79■■□□□ 1.24
HLA-C-204ENST00000415537 LACC1Q8IV20 430 aa22.79■■□□□ 1.24
HLA-C-204ENST00000415537 C10orf107Q8IVU9 208 aa22.79■■□□□ 1.24
HLA-C-204ENST00000415537 SLC44A2Q8IWA5 706 aaPredicted RBP22.79■■□□□ 1.24
HLA-C-204ENST00000415537 DTNBP1Q96EV8 351 aa22.79■■□□□ 1.24
HLA-C-204ENST00000415537 SLC35A4Q96G79 324 aa22.79■■□□□ 1.24
HLA-C-204ENST00000415537 METTL2AQ96IZ6 378 aaKnown RBP22.79■■□□□ 1.24
HLA-C-204ENST00000415537 UGT2B28Q9BY64 529 aa22.79■■□□□ 1.24
HLA-C-204ENST00000415537 TNFRSF12AQ9NP84 129 aa22.79■■□□□ 1.24
HLA-C-204ENST00000415537 OR10H1Q9Y4A9 318 aa22.79■■□□□ 1.24
HLA-C-204ENST00000415537 SLC28A1O00337 649 aa22.78■■□□□ 1.24
HLA-C-204ENST00000415537 SLITRK5O94991 958 aa22.78■■□□□ 1.24
HLA-C-204ENST00000415537 IL2RAP01589 272 aa22.78■■□□□ 1.24
HLA-C-204ENST00000415537 IKBIPQ70UQ0 350 aa22.78■■□□□ 1.24
HLA-C-204ENST00000415537 OR14L1PQ8NHC6 308 aa22.78■■□□□ 1.24
HLA-C-204ENST00000415537 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.78■■□□□ 1.24
HLA-C-204ENST00000415537 ZNF559Q9BR84 538 aa22.78■■□□□ 1.24
HLA-C-204ENST00000415537 ANKZF1Q9H8Y5 726 aa22.78■■□□□ 1.24
HLA-C-204ENST00000415537 SERHLQ9NQF3 203 aa22.78■■□□□ 1.24
HLA-C-204ENST00000415537 TAS2R7Q9NYW3 318 aa22.78■■□□□ 1.24
HLA-C-204ENST00000415537 FIS1Q9Y3D6 152 aa22.78■■□□□ 1.24
HLA-C-204ENST00000415537 DVL2O14641 736 aa22.77■■□□□ 1.24
HLA-C-204ENST00000415537 RGS14O43566 566 aa22.77■■□□□ 1.24
HLA-C-204ENST00000415537 TSPAN2O60636 221 aa22.77■■□□□ 1.24
HLA-C-204ENST00000415537 TRIM13O60858 407 aa22.77■■□□□ 1.24
HLA-C-204ENST00000415537 CHEK2O96017 543 aa22.77■■□□□ 1.24
HLA-C-204ENST00000415537 ACTL6AO96019 429 aa22.77■■□□□ 1.24
HLA-C-204ENST00000415537 TIMP3P35625 211 aa22.77■■□□□ 1.24
HLA-C-204ENST00000415537 PNLIPRP2P54317 469 aa22.77■■□□□ 1.24
HLA-C-204ENST00000415537 KRTAP10-9P60411 292 aa22.77■■□□□ 1.24
HLA-C-204ENST00000415537 MRPS22P82650 360 aaKnown RBP22.77■■□□□ 1.24
HLA-C-204ENST00000415537 ZNF155Q12901 538 aaPredicted RBP22.77■■□□□ 1.24
HLA-C-204ENST00000415537 MYBPHQ13203 477 aa22.77■■□□□ 1.24
HLA-C-204ENST00000415537 CES4AQ5XG92 561 aa22.77■■□□□ 1.24
HLA-C-204ENST00000415537 TMEM107Q6UX40 140 aa22.77■■□□□ 1.24
HLA-C-204ENST00000415537 NPSR1Q6W5P4 371 aa22.77■■□□□ 1.24
HLA-C-204ENST00000415537 SEM1Q6ZVN7 128 aa22.77■■□□□ 1.24
HLA-C-204ENST00000415537 RIBC1Q8N443 379 aaPredicted RBP22.77■■□□□ 1.24
HLA-C-204ENST00000415537 OR2W6PQ8NHA6 318 aa22.77■■□□□ 1.24
HLA-C-204ENST00000415537 KCNN3Q9UGI6 736 aa22.77■■□□□ 1.24
HLA-C-204ENST00000415537 A0A087WV62 115 aa22.76■■□□□ 1.23
HLA-C-204ENST00000415537 AZIN1O14977 448 aa22.76■■□□□ 1.23
HLA-C-204ENST00000415537 BMP5P22003 454 aa22.76■■□□□ 1.23
HLA-C-204ENST00000415537 MC3RP41968 323 aa22.76■■□□□ 1.23
HLA-C-204ENST00000415537 IFFO1Q0D2I5 559 aa22.76■■□□□ 1.23
HLA-C-204ENST00000415537 RCAN2Q14206 197 aa22.76■■□□□ 1.23
HLA-C-204ENST00000415537 PCLAFQ15004 111 aa22.76■■□□□ 1.23
HLA-C-204ENST00000415537 PRSS53Q2L4Q9 553 aa22.76■■□□□ 1.23
HLA-C-204ENST00000415537 SH2D4BQ5SQS7 431 aa22.76■■□□□ 1.23
HLA-C-204ENST00000415537 PLCZ1Q86YW0 608 aa22.76■■□□□ 1.23
HLA-C-204ENST00000415537 HOMEZQ8IX15 550 aa22.76■■□□□ 1.23
HLA-C-204ENST00000415537 WDSUB1Q8N9V3 476 aa22.76■■□□□ 1.23
HLA-C-204ENST00000415537 TNIP2Q8NFZ5 429 aa22.76■■□□□ 1.23
HLA-C-204ENST00000415537 LRRC46Q96FV0 321 aa22.76■■□□□ 1.23
HLA-C-204ENST00000415537 WDYHV1Q96HA8 205 aa22.76■■□□□ 1.23
HLA-C-204ENST00000415537 APOPT1Q96IL0 206 aa22.76■■□□□ 1.23
HLA-C-204ENST00000415537 TRIB1Q96RU8 372 aa22.76■■□□□ 1.23
HLA-C-204ENST00000415537 TRMOQ9BU70 441 aa22.76■■□□□ 1.23
HLA-C-204ENST00000415537 C1orf109Q9NX04 203 aa22.76■■□□□ 1.23
HLA-C-204ENST00000415537 ITGB1BP2Q9UKP3 347 aa22.76■■□□□ 1.23
HLA-C-204ENST00000415537 WIF1Q9Y5W5 379 aa22.76■■□□□ 1.23
HLA-C-204ENST00000415537 PDZD2O15018 2839 aa22.76■■□□□ 1.23
HLA-C-204ENST00000415537 CSMD2Q7Z408 3487 aa22.76■■□□□ 1.23
HLA-C-204ENST00000415537 PRPH2P23942 346 aa22.75■■□□□ 1.23
HLA-C-204ENST00000415537 CEACAM8P31997 349 aaPredicted RBP22.75■■□□□ 1.23
HLA-C-204ENST00000415537 NSUN5P2Q63ZY6 315 aa22.75■■□□□ 1.23
HLA-C-204ENST00000415537 ENPP6Q6UWR7 440 aa22.75■■□□□ 1.23
HLA-C-204ENST00000415537 OR4N2Q8NGD1 307 aa22.75■■□□□ 1.23
HLA-C-204ENST00000415537 EFHD2Q96C19 240 aaPredicted RBP22.75■■□□□ 1.23
HLA-C-204ENST00000415537 GATA5Q9BWX5 397 aaPredicted RBP22.75■■□□□ 1.23
HLA-C-204ENST00000415537 GLIPR2Q9H4G4 154 aa22.75■■□□□ 1.23
HLA-C-204ENST00000415537 LRTM1Q9HBL6 345 aa22.75■■□□□ 1.23
HLA-C-204ENST00000415537 DDX18Q9NVP1 670 aaKnown RBP22.75■■□□□ 1.23
HLA-C-204ENST00000415537 C19orf53Q9UNZ5 99 aaPredicted RBP22.75■■□□□ 1.23
HLA-C-204ENST00000415537 CCL27Q9Y4X3 112 aa22.75■■□□□ 1.23
HLA-C-204ENST00000415537 PLOD2O00469 737 aa22.74■■□□□ 1.23
HLA-C-204ENST00000415537 NEFHP12036 1026 aa22.74■■□□□ 1.23
HLA-C-204ENST00000415537 WNT3P56703 355 aa22.74■■□□□ 1.23
HLA-C-204ENST00000415537 PSG6Q00889 435 aa22.74■■□□□ 1.23
HLA-C-204ENST00000415537 KIAA0040Q15053 153 aa22.74■■□□□ 1.23
HLA-C-204ENST00000415537 ZNHIT3Q15649 155 aaPredicted RBP22.74■■□□□ 1.23
HLA-C-204ENST00000415537 DCST1Q5T197 706 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms