RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 LRFN1Q9P244 771 aa28.21■■■□□ 2.11
CSNK1E-206ENST00000413574 NPFFR2Q9Y5X5 522 aa28.21■■■□□ 2.11
CSNK1E-206ENST00000413574 A0A096LPI6 279 aa28.21■■■□□ 2.11
CSNK1E-206ENST00000413574 GXYLT2A0PJZ3 443 aa28.21■■■□□ 2.11
CSNK1E-206ENST00000413574 NDUFAB1O14561 156 aa28.21■■■□□ 2.11
CSNK1E-206ENST00000413574 SLC22A2O15244 555 aa28.21■■■□□ 2.11
CSNK1E-206ENST00000413574 HOXB9P17482 250 aaPredicted RBP28.21■■■□□ 2.11
CSNK1E-206ENST00000413574 CYB561P49447 251 aa28.21■■■□□ 2.11
CSNK1E-206ENST00000413574 NRG3P56975 720 aa28.21■■■□□ 2.11
CSNK1E-206ENST00000413574 COLEC12Q5KU26 742 aa28.21■■■□□ 2.11
CSNK1E-206ENST00000413574 EXOSC6Q5RKV6 272 aaKnown RBP28.21■■■□□ 2.11
CSNK1E-206ENST00000413574 BHLHB9Q6PI77 547 aa28.21■■■□□ 2.11
CSNK1E-206ENST00000413574 ANGPTL8Q6UXH0 198 aa28.21■■■□□ 2.11
CSNK1E-206ENST00000413574 CCDC197Q8NCU1 140 aa28.21■■■□□ 2.11
CSNK1E-206ENST00000413574 OR5D16Q8NGK9 328 aa28.21■■■□□ 2.11
CSNK1E-206ENST00000413574 GPR151Q8TDV0 419 aa28.21■■■□□ 2.11
CSNK1E-206ENST00000413574 TMBIM1Q969X1 311 aa28.21■■■□□ 2.11
CSNK1E-206ENST00000413574 NEURL3Q96EH8 262 aa28.21■■■□□ 2.11
CSNK1E-206ENST00000413574 HSPBAP1Q96EW2 488 aa28.21■■■□□ 2.11
CSNK1E-206ENST00000413574 PHF12Q96QT6 1004 aa28.21■■■□□ 2.11
CSNK1E-206ENST00000413574 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP28.21■■■□□ 2.115e-7■■■■□ 26.1
CSNK1E-206ENST00000413574 SLC25A37Q9NYZ2 338 aa28.21■■■□□ 2.11
CSNK1E-206ENST00000413574 FAF1Q9UNN5 650 aaPredicted RBP28.21■■■□□ 2.11
CSNK1E-206ENST00000413574 OR10H1Q9Y4A9 318 aa28.21■■■□□ 2.11
CSNK1E-206ENST00000413574 A8MVJ9 347 aa28.2■■■□□ 2.1
CSNK1E-206ENST00000413574 MATN1P21941 496 aa28.2■■■□□ 2.1
CSNK1E-206ENST00000413574 TNFSF10P50591 281 aa28.2■■■□□ 2.1
CSNK1E-206ENST00000413574 OR1C1Q15619 314 aa28.2■■■□□ 2.1
CSNK1E-206ENST00000413574 DESI1Q6ICB0 168 aa28.2■■■□□ 2.1
CSNK1E-206ENST00000413574 OPN5Q6U736 354 aa28.2■■■□□ 2.1
CSNK1E-206ENST00000413574 MSRB3Q8IXL7 192 aa28.2■■■□□ 2.1
CSNK1E-206ENST00000413574 SLC15A4Q8N697 577 aa28.2■■■□□ 2.1
CSNK1E-206ENST00000413574 ANKS4BQ8N8V4 417 aa28.2■■■□□ 2.1
CSNK1E-206ENST00000413574 OR5M3Q8NGP4 307 aa28.2■■■□□ 2.1
CSNK1E-206ENST00000413574 ZFP90Q8TF47 636 aa28.2■■■□□ 2.1
CSNK1E-206ENST00000413574 OMA1Q96E52 524 aa28.2■■■□□ 2.1
CSNK1E-206ENST00000413574 IL1RL2Q9HB29 575 aa28.2■■■□□ 2.1
CSNK1E-206ENST00000413574 HPF1Q9NWY4 346 aa28.2■■■□□ 2.1
CSNK1E-206ENST00000413574 MAP10Q9P2G4 905 aa28.2■■■□□ 2.1
CSNK1E-206ENST00000413574 TO15178 435 aa28.19■■■□□ 2.1
CSNK1E-206ENST00000413574 ACOX3O15254 700 aa28.19■■■□□ 2.1
CSNK1E-206ENST00000413574 NEURL1O76050 574 aa28.19■■■□□ 2.1
CSNK1E-206ENST00000413574 NKX2-2O95096 273 aa28.19■■■□□ 2.1
CSNK1E-206ENST00000413574 ZCCHC18P0CG32 403 aa28.19■■■□□ 2.1
CSNK1E-206ENST00000413574 CASRP41180 1078 aa28.19■■■□□ 2.1
CSNK1E-206ENST00000413574 MAN2A2P49641 1150 aa28.19■■■□□ 2.1
CSNK1E-206ENST00000413574 PLCXD2Q0VAA5 305 aa28.19■■■□□ 2.1
CSNK1E-206ENST00000413574 CYLC2Q14093 348 aaPredicted RBP28.19■■■□□ 2.1
CSNK1E-206ENST00000413574 LRIF1Q5T3J3 769 aa28.19■■■□□ 2.1
CSNK1E-206ENST00000413574 CDC73Q6P1J9 531 aa28.19■■■□□ 2.1
CSNK1E-206ENST00000413574 ZCCHC12Q6PEW1 402 aa28.19■■■□□ 2.1
CSNK1E-206ENST00000413574 MDGA2Q7Z553 956 aa28.19■■■□□ 2.1
CSNK1E-206ENST00000413574 RNF130Q86XS8 419 aa28.19■■■□□ 2.1
CSNK1E-206ENST00000413574 CYP4Z2PQ8N1L4 340 aa28.19■■■□□ 2.1
CSNK1E-206ENST00000413574 SLC35A4Q96G79 324 aa28.19■■■□□ 2.1
CSNK1E-206ENST00000413574 BBC3Q96PG8 261 aaPredicted RBP28.19■■■□□ 2.1
CSNK1E-206ENST00000413574 VAPAQ9P0L0 249 aa28.19■■■□□ 2.1
CSNK1E-206ENST00000413574 KCNE3Q9Y6H6 103 aa28.19■■■□□ 2.1
CSNK1E-206ENST00000413574 KALRNO60229 2985 aa28.19■■■□□ 2.1
CSNK1E-206ENST00000413574 ATXN7O15265 892 aaPredicted RBP28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 DPM1O60762 260 aa28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 KCNH1O95259 989 aa28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 ALOX5P09917 674 aa28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 FBXO45P0C2W1 286 aa28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 SFTPCP11686 197 aa28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 FBXW4P57775 412 aa28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 MAPRE2Q15555 327 aa28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 ZNF791Q3KP31 576 aaPredicted RBP28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 NADK2Q4G0N4 442 aa28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 DLEU7Q6UYE1 221 aa28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 CDS1Q92903 461 aa28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 SPACA9Q96E40 222 aaPredicted RBP28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 LRRC37BQ96QE4 947 aa28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 OR7D2Q96RA2 312 aa28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 HES7Q9BYE0 225 aa28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 TRIM45Q9H8W5 580 aaPredicted RBP28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 Q9N2J8 555 aa28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 REP15Q6BDI9 236 aa28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 TNFAIP8L2Q6P589 184 aaPredicted RBP28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 GALNT10Q86SR1 603 aa28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 PTRH1Q86Y79 214 aaKnown RBP28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 SLC34A3Q8N130 599 aa28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 DPP10Q8N608 796 aa28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 MDS2Q8NDY4 140 aa28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 ADAMTS15Q8TE58 950 aa28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 OR51I1Q9H343 314 aa28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 TPT1P8Q9HAU6 139 aa28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 CBLCQ9ULV8 474 aa28.18■■■□□ 2.1
CSNK1E-206ENST00000413574 CAPN14A8MX76 684 aa28.17■■■□□ 2.1
CSNK1E-206ENST00000413574 DCTN3O75935 186 aa28.17■■■□□ 2.1
CSNK1E-206ENST00000413574 COX4I1P13073 169 aa28.17■■■□□ 2.1
CSNK1E-206ENST00000413574 MMEL1Q495T6 779 aa28.17■■■□□ 2.1
CSNK1E-206ENST00000413574 COX20Q5RI15 118 aa28.17■■■□□ 2.1
CSNK1E-206ENST00000413574 DHDDSQ86SQ9 333 aa28.17■■■□□ 2.1
CSNK1E-206ENST00000413574 FAM13CQ8NE31 585 aa28.17■■■□□ 2.1
CSNK1E-206ENST00000413574 OR10G3Q8NGC4 313 aa28.17■■■□□ 2.1
CSNK1E-206ENST00000413574 RMND5BQ96G75 393 aaPredicted RBP28.17■■■□□ 2.1
CSNK1E-206ENST00000413574 PIGUQ9H490 435 aa28.17■■■□□ 2.1
CSNK1E-206ENST00000413574 LUZP4Q9P127 313 aa28.17■■■□□ 2.1
CSNK1E-206ENST00000413574 RFX3P48380 749 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms