RNA–Protein interactions for RNA: ENST00000412256.1

RAB11FIP3-202, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-202ENST00000412256 NINJ2Q9NZG7 142 aa12.64□□□□□ -0.39
RAB11FIP3-202ENST00000412256 DKKL1Q9UK85 242 aa12.64□□□□□ -0.39
RAB11FIP3-202ENST00000412256 PACSIN3Q9UKS6 424 aa12.64□□□□□ -0.39
RAB11FIP3-202ENST00000412256 GPR55Q9Y2T6 319 aaPredicted RBP12.64□□□□□ -0.39
RAB11FIP3-202ENST00000412256 DOCK7Q96N67 2140 aa12.64□□□□□ -0.39
RAB11FIP3-202ENST00000412256 VPS13CQ709C8 3753 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 A0A1W2PPR1 153 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 OR6C70A6NIJ9 312 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 TO15178 435 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 ARHGEF9O43307 516 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 BCAS2O75934 225 aaPredicted RBP12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 TGM6O95932 706 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 CHMP24386 653 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 DPP4P27487 766 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 SRD5A2P31213 254 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 LHX2P50458 406 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 FAM27E3Q08E93 113 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 TSNAXIP1Q2TAA8 658 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 UBAP2Q5T6F2 1119 aaKnown RBP12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 SHEQ5VZ18 495 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 FAM219BQ5XKK7 198 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 LARP4Q71RC2 724 aaKnown RBP eCLIP12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 ADGRE4PQ86SQ3 457 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 P3H2Q8IVL5 708 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 CNEP1R1Q8N9A8 125 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 SMPDL3BQ92485 455 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 DTNBP1Q96EV8 351 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 ZNF681Q96N22 645 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 FAM111AQ96PZ2 611 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 MRPL57Q9BQC6 102 aaKnown RBP12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 G6PC3Q9BUM1 346 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 BRF2Q9HAW0 419 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 ZDHHC18Q9NUE0 388 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 C6orf203Q9P0P8 240 aaPredicted RBP12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 CLCF1Q9UBD9 225 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 HEY2Q9UBP5 337 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 VPS29Q9UBQ0 182 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 DLGAP4Q9Y2H0 992 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 WIF1Q9Y5W5 379 aa12.63□□□□□ -0.39
RAB11FIP3-202ENST00000412256 A0A1W2PNV4 684 aa12.62□□□□□ -0.39
RAB11FIP3-202ENST00000412256 ZIC3O60481 467 aa12.62□□□□□ -0.39
RAB11FIP3-202ENST00000412256 ABCB7O75027 752 aa12.62□□□□□ -0.39
RAB11FIP3-202ENST00000412256 OR4F21O95013 312 aa12.62□□□□□ -0.39
RAB11FIP3-202ENST00000412256 COL6A2P12110 1019 aa12.62□□□□□ -0.39
RAB11FIP3-202ENST00000412256 GRK2P25098 689 aa12.62□□□□□ -0.39
RAB11FIP3-202ENST00000412256 IL12BP29460 328 aa12.62□□□□□ -0.39
RAB11FIP3-202ENST00000412256 CLDN18P56856 261 aa12.62□□□□□ -0.39
RAB11FIP3-202ENST00000412256 CORO7P57737 925 aa12.62□□□□□ -0.39
RAB11FIP3-202ENST00000412256 TRA2BP62995 288 aaKnown RBP12.62□□□□□ -0.39
RAB11FIP3-202ENST00000412256 EFR3AQ14156 821 aa12.62□□□□□ -0.39
RAB11FIP3-202ENST00000412256 ERCC6LQ2NKX8 1250 aa12.62□□□□□ -0.39
RAB11FIP3-202ENST00000412256 SYT10Q6XYQ8 523 aa12.62□□□□□ -0.39
RAB11FIP3-202ENST00000412256 TAOK1Q7L7X3 1001 aa12.62□□□□□ -0.39
RAB11FIP3-202ENST00000412256 UBQLNLQ8IYU4 475 aa12.62□□□□□ -0.39
RAB11FIP3-202ENST00000412256 CDYL2Q8N8U2 506 aa12.62□□□□□ -0.39
RAB11FIP3-202ENST00000412256 OR9A2Q8NGT5 310 aa12.62□□□□□ -0.39
RAB11FIP3-202ENST00000412256 ZNF483Q8TF39 744 aaPredicted RBP12.62□□□□□ -0.39
RAB11FIP3-202ENST00000412256 EXOSC8Q96B26 276 aaKnown RBP12.62□□□□□ -0.39
RAB11FIP3-202ENST00000412256 WFIKKN1Q96NZ8 548 aa12.62□□□□□ -0.39
RAB11FIP3-202ENST00000412256 LRRC1Q9BTT6 524 aa12.62□□□□□ -0.39
RAB11FIP3-202ENST00000412256 KLHL28Q9NXS3 571 aa12.62□□□□□ -0.39
RAB11FIP3-202ENST00000412256 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 GNG14A0A1W2PPG7 69 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 POC1B-GALNT4F8VUJ3 575 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 MANBAO00462 879 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 MSTNO14793 375 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 SMPD2O60906 423 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 TNFSF13O75888 250 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 KRT6AP02538 564 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 KRT6BP04259 564 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 IL3P08700 152 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 RPS17P08708 135 aaKnown RBP12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 CT45A8P0DMV1 189 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 CT45A9P0DMV2 189 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 CHN1P15882 459 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 ZNF708P17019 499 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 HSD17B3P37058 310 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 KRT6CP48668 564 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 SERPINB9P50453 376 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 CT45A2Q5DJT8 189 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 ZNF628Q5EBL2 1059 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 TCHHL1Q5QJ38 904 aaPredicted RBP12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 C8orf74Q6P047 294 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 CXorf67Q86X51 503 aaPredicted RBP12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 SLC44A2Q8IWA5 706 aaPredicted RBP12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 OR4K17Q8NGC6 315 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 EFHD2Q96C19 240 aaPredicted RBP12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 STARD4Q96DR4 205 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 PGM2Q96G03 612 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 SLC35A4Q96G79 324 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 BTBD9Q96Q07 612 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 MRPL46Q9H2W6 279 aaKnown RBP12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 GIMAP4Q9NUV9 329 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 ZNF226Q9NYT6 803 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 SENP1Q9P0U3 644 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 MRPS18CQ9Y3D5 142 aaKnown RBP12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 OR10H1Q9Y4A9 318 aa12.61□□□□□ -0.39
RAB11FIP3-202ENST00000412256 SLC22A20A6NK97 555 aa12.6□□□□□ -0.39
RAB11FIP3-202ENST00000412256 A8MT66 165 aa12.6□□□□□ -0.39
RAB11FIP3-202ENST00000412256 TRIM49D1C9J1S8 452 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms