RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 CFLARO15519 480 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 DUX1O43812 170 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 TSPAN2O60636 221 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 TPST2O60704 377 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 GLRA3O75311 464 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 TSPAN12O95859 305 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 PGK1P00558 417 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 KRT6AP02538 564 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 GSTA1P08263 222 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 DEKP35659 375 aaKnown RBP3.97□□□□□ -1.77
BRCA1-204ENST00000412061 MAGEA5P43359 124 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 GAS1P54826 345 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 CLDN8P56748 225 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 CDKL1Q00532 357 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 MYL7Q01449 175 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 BDH1Q02338 343 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 MAB21L1Q13394 359 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 GRB14Q14449 540 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 EXT1Q16394 746 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 HIKESHIQ53FT3 197 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 XKR7Q5GH72 579 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 FGD3Q5JSP0 725 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 PDZK1Q5T2W1 519 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 DMKNQ6E0U4 476 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-204ENST00000412061 NADSYN1Q6IA69 706 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 OR4F3Q6IEY1 312 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 ZNF562Q6V9R5 426 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 NLRP9Q7RTR0 991 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 GPC2Q8N158 579 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 SPEM1Q8N4L4 309 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 TEX26Q8N6G2 289 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 CCDC185Q8N715 623 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 TCEANCQ8N8B7 351 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 OR2T12Q8NG77 320 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 M1APQ8TC57 530 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 TSEN15Q8WW01 171 aaKnown RBP3.97□□□□□ -1.77
BRCA1-204ENST00000412061 ST8SIA1Q92185 356 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 EFHD2Q96C19 240 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-204ENST00000412061 ZNF707Q96C28 371 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-204ENST00000412061 TSNARE1Q96NA8 513 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 DUX5Q96PT3 197 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 CENPKQ9BS16 269 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 TSSK1BQ9BXA7 367 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 C6orf106Q9H6K1 298 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-204ENST00000412061 SYNDIG1Q9H7V2 258 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 ZNF160Q9HCG1 818 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 CHRAC1Q9NRG0 131 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 C2orf42Q9NWW7 574 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 GPR83Q9NYM4 423 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 C19orf25Q9UFG5 118 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-204ENST00000412061 ZNF639Q9UID6 485 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 RNF6Q9Y252 685 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 CA5BQ9Y2D0 317 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 SLC9A8Q9Y2E8 581 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 NPTNQ9Y639 398 aa3.97□□□□□ -1.77
BRCA1-204ENST00000412061 CENPJQ9HC77 1338 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-204ENST00000412061 LOC100653049A0A140TA62 436 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 ASPDHA6ND91 283 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 ZNF879B4DU55 563 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 CETN3O15182 167 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 XPNPEP2O43895 674 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 CIDEAO60543 219 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 E2F6O75461 281 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 KRT33AO76009 404 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 KRT34O76011 436 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 BAG4O95429 457 aaKnown RBP3.96□□□□□ -1.77
BRCA1-204ENST00000412061 IVLP07476 585 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 FHP07954 510 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 CYP2B6P20813 491 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 TUBG1P23258 451 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 MAT2AP31153 395 aaKnown RBP3.96□□□□□ -1.77
BRCA1-204ENST00000412061 CASP14P31944 242 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 RPS5P46782 204 aaKnown RBP3.96□□□□□ -1.77
BRCA1-204ENST00000412061 CRYBB1P53674 252 aaPredicted RBP3.96□□□□□ -1.77
BRCA1-204ENST00000412061 RGS8P57771 180 aaPredicted RBP3.96□□□□□ -1.77
BRCA1-204ENST00000412061 NANOS2P60321 138 aaKnown RBP3.96□□□□□ -1.77
BRCA1-204ENST00000412061 NOP14P78316 857 aaKnown RBP3.96□□□□□ -1.77
BRCA1-204ENST00000412061 ENPP2Q13822 863 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 TFDP1Q14186 410 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 GANABQ14697 944 aaKnown RBP3.96□□□□□ -1.77
BRCA1-204ENST00000412061 DUSP5Q16690 384 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 NKAIN1Q4KMZ8 207 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 SLC25A53Q5H9E4 307 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 TCHHL1Q5QJ38 904 aaPredicted RBP3.96□□□□□ -1.77
BRCA1-204ENST00000412061 PDSS1Q5T2R2 415 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 DCAF12Q5T6F0 453 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 AGBL2Q5U5Z8 902 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 LCN1P1Q5VSP4 162 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 METTL11BQ5VVY1 283 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 C9orf57Q5W0N0 161 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 STEAP1BQ6NZ63 245 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 Q6ZRG5 221 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 TUBA1AQ71U36 451 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 CCDC80Q76M96 950 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 C16orf82Q7Z2V1 217 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 ITIH5Q86UX2 942 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 TGIF2LXQ8IUE1 241 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 PYROXD2Q8N2H3 581 aa3.96□□□□□ -1.77
BRCA1-204ENST00000412061 FAM83FQ8NEG4 500 aaPredicted RBP3.96□□□□□ -1.77
BRCA1-204ENST00000412061 OR4D5Q8NGN0 318 aa3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms