RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 TLR4O00206 839 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 SCAMP1O15126 338 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 PRKRAO75569 313 aaKnown RBP12.72□□□□□ -0.37
LIMS1-205ENST00000410093 GPR75O95800 540 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 FADS2O95864 444 aaKnown RBP12.72□□□□□ -0.37
LIMS1-205ENST00000410093 CHRNB1P11230 501 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 ZNF182P17025 639 aaPredicted RBP12.72□□□□□ -0.37
LIMS1-205ENST00000410093 UGT2B10P36537 528 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 MASP1P48740 699 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 HHEXQ03014 270 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 PIGFQ07326 219 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 FUT5Q11128 374 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 BIKQ13323 160 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 IRF3Q14653 427 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 NCF4Q15080 339 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 ELOCQ15369 112 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 SMN1Q16637 294 aaKnown RBP12.72□□□□□ -0.37
LIMS1-205ENST00000410093 TMEM44Q2T9K0 475 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 INAVAQ3KP66 663 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 CYP27C1Q4G0S4 372 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 DEFB134Q4QY38 66 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 CSNK1A1LQ8N752 337 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 CDRT4Q8N9R6 151 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 TSTD1Q8NFU3 115 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 CADM4Q8NFZ8 388 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 SLC7A13Q8TCU3 470 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 GNPDA2Q8TDQ7 276 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 JPH3Q8WXH2 748 aaPredicted RBP12.72□□□□□ -0.37
LIMS1-205ENST00000410093 CD93Q9NPY3 652 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 POMT2Q9UKY4 750 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 CYP8B1Q9UNU6 501 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 B3GNT3Q9Y2A9 372 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 RPL36Q9Y3U8 105 aaKnown RBP12.72□□□□□ -0.37
LIMS1-205ENST00000410093 CACNA1HO95180 2353 aa12.72□□□□□ -0.37
LIMS1-205ENST00000410093 HYKKA2RU49 373 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 AP3D1O14617 1153 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 GALR3O60755 368 aaPredicted RBP12.71□□□□□ -0.38
LIMS1-205ENST00000410093 OR5F1O95221 314 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 INHBBP09529 407 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 C8orf89P0DMQ9 161 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 SLC15A1P46059 708 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 FASLGP48023 281 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 RAB38P57729 211 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 TAS2R41P59536 307 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 DUSP2Q05923 314 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 TARDBPQ13148 414 aaKnown RBP eCLIP12.71□□□□□ -0.38
LIMS1-205ENST00000410093 DUSP8Q13202 625 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 RUNX2Q13950 521 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 ZNF528Q3MIS6 628 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 ZNF628Q5EBL2 1059 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 EXOSC6Q5RKV6 272 aaKnown RBP12.71□□□□□ -0.38
LIMS1-205ENST00000410093 PODNL1Q6PEZ8 512 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 CCDC81Q6ZN84 652 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 GKN2Q86XP6 184 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 CCDC103Q8IW40 242 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 OR6T1Q8NGN1 323 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 ZDHHC1Q8WTX9 485 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 C16orf58Q96GQ5 468 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 CSF3RQ99062 836 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 CCDC3Q9BQI4 270 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 GPR174Q9BXC1 333 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 POLDIP3Q9BY77 421 aaKnown RBP12.71□□□□□ -0.38
LIMS1-205ENST00000410093 CHRNA10Q9GZZ6 450 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 SAP130Q9H0E3 1048 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 SYNPO2LQ9H987 977 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 IL21RQ9HBE5 538 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 SLC25A19Q9HC21 320 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 RHCGQ9UBD6 479 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 A3GALT2U3KPV4 340 aa12.71□□□□□ -0.38
LIMS1-205ENST00000410093 PIEZO1Q92508 2521 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 TRBV23OR9-2A0A075B6M9 112 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 TTC36A6NLP5 189 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 P2RX6O15547 441 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 COQ9O75208 318 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 SEMA7AO75326 666 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 CYP7B1O75881 506 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 STATHP02808 62 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 DBIP07108 87 aaKnown RBP12.7□□□□□ -0.38
LIMS1-205ENST00000410093 ALOX5P09917 674 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 CCNYL3P0C7X3 344 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 POU2F1P14859 743 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 CD36P16671 472 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 CD27P26842 260 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 CNR2P34972 360 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 MAP2K4P45985 399 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 SMSP52788 366 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 ST3GAL4Q11206 333 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 SEC23BQ15437 767 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 DECR1Q16698 335 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 TIGD6Q17RP2 521 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 PLAG1Q6DJT9 500 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 RRM2BQ7LG56 351 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 TRIM73Q86UV7 250 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 FAM26EQ8N5C1 309 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 MORN4Q8NDC4 146 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 OR7G2Q8NG99 324 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 OR4K5Q8NGD3 323 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 OR4D11Q8NGI4 311 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 OR52P1PQ8NH57 321 aa12.7□□□□□ -0.38
LIMS1-205ENST00000410093 UBE2FQ969M7 185 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms